Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G06
         (1315 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    30   8.1  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    30   8.1  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 19/55 (34%), Positives = 20/55 (36%)
 Frame = -2

Query: 756 GXPGXXLXGGLGXVXGGXGFXGEXPXXXXXXXXXXPXLXXXXFWXGXXGGGGXGG 592
           G PG    GG G   GG GF G             P       + G  GGGG GG
Sbjct: 358 GAPGSPGGGGFGGQGGGGGFGG---GGGRGGAPGAPGSPGGGGFGGQGGGGGYGG 409


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 19/55 (34%), Positives = 20/55 (36%)
 Frame = -2

Query: 756 GXPGXXLXGGLGXVXGGXGFXGEXPXXXXXXXXXXPXLXXXXFWXGXXGGGGXGG 592
           G PG    GG G   GG GF G             P       + G  GGGG GG
Sbjct: 430 GAPGSPGGGGFGGQGGGGGFGG---GGGRGGAPGAPGSPGGGGFGGQGGGGGYGG 481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,956,438
Number of Sequences: 53049
Number of extensions: 432593
Number of successful extensions: 2183
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7130586750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)