Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F24
(1338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 37 0.037
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 37 0.037
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 1.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 4.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 4.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 4.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.6
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 36.7 bits (81), Expect = 0.037
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPX-SGXGXPPXXGXGXXXPPXXXXTGGPLXPG 971
PP G GG GG P G G PP G PP GGP PG
Sbjct: 167 PPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGG----XPXSGXGXPPXXGXGXXXPPXXXXTGGPLXPGK 974
PPL GG P PGG G G PP G G PP GGP PG+
Sbjct: 155 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHG-GQGGPPGHGGMGGP-PPGQ 205
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -3
Query: 1126 GPPPXXXXFXXPPPKKXPRXXXXPXXXXGXXXPXGXKXXXFXXGWXXXXXXXPGXRGPPV 947
GPPP F P P G P G PG G
Sbjct: 132 GPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 191
Query: 946 XXXXGGFXHPXPXXGGXPXPEXGXPPG 866
GG P P GG P PG
Sbjct: 192 PPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.7 bits (81), Expect = 0.037
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPX-SGXGXPPXXGXGXXXPPXXXXTGGPLXPG 971
PP G GG GG P G G PP G PP GGP PG
Sbjct: 447 PPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGG----XPXSGXGXPPXXGXGXXXPPXXXXTGGPLXPGK 974
PPL GG P PGG G G PP G G PP GGP PG+
Sbjct: 435 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHG-GQGGPPGHGGMGGP-PPGQ 485
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -3
Query: 1126 GPPPXXXXFXXPPPKKXPRXXXXPXXXXGXXXPXGXKXXXFXXGWXXXXXXXPGXRGPPV 947
GPPP F P P G P G PG G
Sbjct: 412 GPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 471
Query: 946 XXXXGGFXHPXPXXGGXPXPEXGXPPG 866
GG P P GG P PG
Sbjct: 472 PPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFNPSGAP 461
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 462 P-------SGGPPGPFNPSGAPPSGGPPG 483
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFNPSGAP 446
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 447 P-------SGGPPGPFNPSGAPPSGGPPG 468
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 224 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFDPSGAP 281
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 282 P-------SGGPPGPFDPSGAPPSGGPPG 303
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 284 GGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGG--PPGPFDPSGAP 341
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 342 P-------SGGPPGPFNPSGAPPSGGPPG 363
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP S G P G G P
Sbjct: 329 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG--PPGPFDPSGAP 386
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 387 P-------SGGPPGPFDPSGAPPSGGPPG 408
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFNPSGAP 431
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 432 P-------SGGPPGPFNPSGAPPSGGPPG 453
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP S G P G G P
Sbjct: 269 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGG--PPGPFNPSGAP 326
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 327 P-------SGGPPGPFDPSGAPPSGGPPG 348
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP + S G P G G P
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGG--PTGPFDPSGAP 221
Query: 758 PXXXXRXXXGSXPGXF--TGKPXRFSPXG 838
P G PG F +G P P G
Sbjct: 222 P-------SGGPPGPFNPSGAPPSGGPPG 243
Score = 29.1 bits (62), Expect = 7.4
Identities = 28/105 (26%), Positives = 30/105 (28%), Gaps = 2/105 (1%)
Frame = +3
Query: 831 PLGKGGXXPXXXPGGXPXSGXGXPPXXG-XGXXXPPXXXXTGGPLXPGKXXXXXXXP-XX 1004
P G G P P G P + PP G G P +GGP PG P
Sbjct: 184 PFGPSGAPPSGGPPG-PFNPSEAPPSGGPTGPFDPSGAPPSGGP--PGPFNPSGAPPSGG 240
Query: 1005 KXXXFXPXGXXXPXXXXGFXXXRGXFXGGGXXXXXXXGGGPXXXG 1139
F P G G G GG G P G
Sbjct: 241 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 285
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 578 GGXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVP 757
GG PG + P G P G P PP S G P G G P
Sbjct: 449 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG--PPGPFNPSGAP 506
Query: 758 P 760
P
Sbjct: 507 P 507
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ G P PGG P PP G PP P+ P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ GG P PGG P G PP G P +GGP P
Sbjct: 720 PPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPP 761
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXP--XSGXGXPPXXGXGXXXPPXXXXTGG 956
PP+ GG P PGG P G PP G PP GG
Sbjct: 736 PPI-TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +3
Query: 786 VPXPXXLXENLXAFPPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPP---XXXXTGG 956
+P P NL A P GG G P G PP G PP TGG
Sbjct: 683 IPLPPPTKMNLSA-PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 741
Query: 957 PLXP 968
P P
Sbjct: 742 PPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ G P PGG P PP G PP P+ P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ GG P PGG P G PP G P +GGP P
Sbjct: 720 PPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPP 761
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXP--XSGXGXPPXXGXGXXXPPXXXXTGG 956
PP+ GG P PGG P G PP G PP GG
Sbjct: 736 PPI-TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +3
Query: 786 VPXPXXLXENLXAFPPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPP---XXXXTGG 956
+P P NL A P GG G P G PP G PP TGG
Sbjct: 683 IPLPPPTKMNLSA-PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 741
Query: 957 PLXP 968
P P
Sbjct: 742 PPPP 745
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ G P PGG P PP G PP P+ P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGPLXP 968
PP+ GG P PGG P G PP G P +GGP P
Sbjct: 303 PPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPP----ISGGPPPP 344
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXP--XSGXGXPPXXGXGXXXPPXXXXTGG 956
PP+ GG P PGG P G PP G PP GG
Sbjct: 319 PPI-TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +3
Query: 786 VPXPXXLXENLXAFPPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPP---XXXXTGG 956
+P P NL A P GG G P G PP G PP TGG
Sbjct: 266 IPLPPPTKMNLSA-PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 324
Query: 957 PLXP 968
P P
Sbjct: 325 PPPP 328
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +3
Query: 822 AFPPLGKGGXXPXXXPGGXP-XSGXGXPPXXGXGXXXP--PXXXXTGGPLXPG 971
AFPP G P P G P G G P G P P +GGP PG
Sbjct: 284 AFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPG 336
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 828 PPLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPP 935
PP G G P G P G G PP G G PP
Sbjct: 413 PPGGPGAPGSYGPPQGGP-GGFGPPPPGGPGAYGPP 447
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 831 PLGKGGXXPXXXPGGXPXSGXGXPPXXGXGXXXPPXXXXTGGP 959
P G GG P PGG G PP G G PP GGP
Sbjct: 403 PGGPGGYGPPP-PGGPGAPGSYGPPQGGPGGFGPP---PPGGP 441
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +2
Query: 581 GXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVPP 760
G PGK P NP KG P PP G P G PG P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG--PAGPPGPPG-PD 170
Query: 761 XXXXRXXXGSXPGXFTGKPXRFSPXGEGG 847
S PG G P P G G
Sbjct: 171 GNPGSPAGPSGPGP-AGPPGPAGPAGNDG 198
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +2
Query: 581 GXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVPP 760
G PGK P NP KG P PP G P G PG P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG--PAGPPGPPG-PD 170
Query: 761 XXXXRXXXGSXPGXFTGKPXRFSPXGEGG 847
S PG G P P G G
Sbjct: 171 GNPGSPAGPSGPGP-AGPPGPAGPAGNDG 198
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +2
Query: 581 GXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVPP 760
G PGK P NP KG P PP G P G PG P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG--PAGPPGPPG-PD 170
Query: 761 XXXXRXXXGSXPGXFTGKPXRFSPXGEGG 847
S PG G P P G G
Sbjct: 171 GNPGSPAGPSGPGP-AGPPGPAGPAGNDG 198
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +2
Query: 581 GXPGKXLXTKGPXKGXNPXKGRXXGXFPXAPPPXXXSKXSTXXSXGXXPXGXXKXPGVPP 760
G PGK P NP KG P PP G P G PG P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAG--PAGPPGPPG-PD 170
Query: 761 XXXXRXXXGSXPGXFTGKPXRFSPXGEGG 847
S PG G P P G G
Sbjct: 171 GNPGSPAGPSGPGP-AGPPGPAGPAGNDG 198
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 970 PGXRGPPVXXXXGGFXHPXPXXGGXPXPE--XGXPP 869
PG PP GG P P GG P P G PP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,842,049
Number of Sequences: 27780
Number of extensions: 289714
Number of successful extensions: 662
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3756810758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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