Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F23
         (1194 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    25   1.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   1.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   1.5  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    24   2.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   6.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   6.0  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 892 TRARHLYHHIXTHTGRXPF 836
           TR  HL  H+  HTG  P+
Sbjct: 20  TRDHHLKTHMRLHTGERPY 38


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 889 RARHLYHHIXTHTGRXPFV 833
           +  HL  H+  HTG  PFV
Sbjct: 328 KTSHLKAHLRWHTGERPFV 346


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 892 TRARHLYHHIXTHTGRXPF 836
           TR  HL  H+  HTG  P+
Sbjct: 173 TRDHHLKTHMRLHTGERPY 191


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 877 LYHHIXTHTGRXPFVPXQLNXSY 809
           L  HI THTG  PF     N ++
Sbjct: 23  LQGHIRTHTGEKPFSCTYCNRAF 45


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 892 TRARHLYHHIXTHTGRXPF 836
           ++A +L  H+ TH+G  PF
Sbjct: 32  SQAANLTAHVRTHSGEKPF 50


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 892 TRARHLYHHIXTHTGRXPF 836
           ++A +L  H+ TH+G  PF
Sbjct: 288 SQAANLTAHVRTHSGEKPF 306


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 880 HLYHHIXTHTGRXPF 836
           HL +H+  H G  PF
Sbjct: 245 HLEYHLRNHAGSKPF 259


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 880 HLYHHIXTHTGRXPF 836
           HL +H+  H G  PF
Sbjct: 3   HLEYHLRNHAGSKPF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,780
Number of Sequences: 336
Number of extensions: 2655
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34733218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)