Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F23
         (1194 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    80   1e-16
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   5.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   7.6  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 80.2 bits (189), Expect = 1e-16
 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
 Frame = +1

Query: 130 MADQLTESQXAEFKEAFSLFDKXGXGTITXKXLGTVMRSLGQNPTEAELQXMINEVDADG 309
           MA+ L + +  + +  FS++D  G G +    LG  +R+L  NPT  EL   +      G
Sbjct: 1   MANDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPT-IELIGKMGGTQKRG 59

Query: 310 NGTIDFPEFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 483
              I F EFL + +  +K K+    E+  E  +++DK+ +G +  AEL H +T LGE+L 
Sbjct: 60  EKKIKFEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLD 119

Query: 484 DEEVDEMIREA--DIDGDGQVNYEEFVTMM 567
           D E+D ++++     D DG + Y  F+  M
Sbjct: 120 DVELDNVMKDCMDPEDDDGNIPYAPFLKKM 149


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 5.8
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
 Frame = -3

Query: 940 HRGTHA--HIYTNIS*XPTRARHLYHHIXTHTGRXPF 836
           +R TH   H  T           L  HI THTG  PF
Sbjct: 204 YRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPF 240


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 141 LIRHWRLTWMRWSDTKKAQTTPQKRPHGPTA 49
           +IR+   TW RW   K+      +R H P A
Sbjct: 782 IIRYGVATWGRWVLDKETHRKSVQRAHRPGA 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,049
Number of Sequences: 2352
Number of extensions: 11329
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135295257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)