Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F23
         (1194 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    26   0.75 
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    25   1.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   2.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   5.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   5.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   9.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 0.75
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 940 HRGTHAHIYTNIS*XPTRARHLYHHIXTHTGRXPFV 833
           H G   H  T  S    ++  L  H+ THTG  P+V
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYV 205



 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 888 EPDTYTITLXRTPDVFPLYRYS 823
           EP+    T   TP  FP Y YS
Sbjct: 320 EPNDEVATYDNTPRDFPYYMYS 341


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 892 TRARHLYHHIXTHTGRXPF 836
           TR  HL  H+  HTG  P+
Sbjct: 20  TRDHHLKTHMRLHTGEKPY 38


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 877 LYHHIXTHTGRXPFVPXQLNXSY 809
           L  HI THTG  PF     N ++
Sbjct: 58  LQGHIRTHTGEKPFSCQHCNRAF 80


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 495 DLLVSEFLS--EVGHDVAQLGRGDEAVAVLVE 406
           DL  S+ L   E+ HDVA  G+G E V++ V+
Sbjct: 163 DLNTSQLLKQVEIPHDVATTGKG-ELVSLTVQ 193


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 880 HLYHHIXTHTGRXPFVPXQLNXSYIVK--LTEYFKS 779
           HL +H+  H G  PF   + + S + K  L  + KS
Sbjct: 3   HLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS 38


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +3

Query: 558 HHDDVEVSRRLVCV*KAENLNIHFVS*HTILA 653
           H    E     VC+   E + +HF + H  +A
Sbjct: 183 HQSGSEAEAEFVCIATPEAIELHFTTDHPSVA 214


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 178 FSLFDKXGXGTITXKXLGTVMRS--LGQNPTEAELQXMINEVDADGNGTIDFPEF 336
           FS +D+   G +  + L     +  L +      L  MI+  D DG+G ++  EF
Sbjct: 242 FSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEF 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,847
Number of Sequences: 438
Number of extensions: 2953
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40729338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)