Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F22
(1185 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 351 8e-98
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 99 6e-22
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 90 6e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 88 3e-18
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 88 3e-18
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 81 2e-16
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 81 3e-16
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 78 2e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 1e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 72 2e-13
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 71 2e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 67 5e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 63 8e-11
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 62 2e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 60 4e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 57 6e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 55 2e-08
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 38 0.004
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 37 0.006
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 36 0.011
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.034
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 31 0.41
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 1.7
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 28 2.9
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 27 3.9
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 27 3.9
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 6.7
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 26 8.9
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 351 bits (864), Expect = 8e-98
Identities = 161/206 (78%), Positives = 176/206 (85%)
Frame = +3
Query: 150 PTFKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAG 329
PTFK VLVG GGTGKTTFVK HLTG FE KY+A LGVEVHPL FHTN G I FNVWDTAG
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAG 67
Query: 330 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKD 509
QEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKVD+K+
Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVKE 127
Query: 510 RKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPEVT 689
RKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL PPEV
Sbjct: 128 RKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQ 187
Query: 690 MDPQWQNQIEKDLQDAQNTALPEEDE 767
+D Q Q ++++ +A LP+ED+
Sbjct: 188 VDQQLLAQYQQEMNEAAAMPLPDEDD 213
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 99 bits (238), Expect = 6e-22
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Frame = +3
Query: 156 FKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQE 335
FK +L+G G GK+ + + Y++ +GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 512
+F + YY II++DVT + ++ NV W +++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 513 KVKAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 629
KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 89.8 bits (213), Expect = 6e-19
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Frame = +3
Query: 156 FKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQE 335
FK V +G GKT+ + + F+ Y A +G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD 509
+F L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLAD 130
Query: 510 RKVKAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIGDGNLE 650
++ + + K L+ + + SAK+ +N + F +A+ L G N+E
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 87.8 bits (208), Expect = 3e-18
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 332
K VL+G GK++ V + F+ + +G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 333 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-K 506
E++ L YY CAI+++D+T + + +W ++L R EGI I L GNK+D+ +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 507 DRKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 629
+R+ KA + + NL +++ SAK+ N + F +A+KL
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 87.8 bits (208), Expect = 3e-18
Identities = 48/190 (25%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K +++G G GKT+ + ++ F Y A +G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRD-LVRVC----EGIPIVLCGNKVDI 503
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 504 KDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPAL 671
+++K K+K + F + + Y++ SAK N ++ F +A+ + + + + +A
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFT 189
Query: 672 LPPEVTMDPQ 701
P + M+ Q
Sbjct: 190 DPIHLDMESQ 199
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 81.4 bits (192), Expect = 2e-16
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K +L+G G GK+ + F ++ +G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKD-R 512
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 513 KVK-AKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 629
+V + + +++ + SAK+N N ++ F LAR++
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 81.0 bits (191), Expect = 3e-16
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Frame = +3
Query: 156 FKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQE 335
FK VL+G G GK+ + F + + +GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIKD- 509
++ + YY A+I++D+T + ++ NV W ++L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 510 RKVKAKTI-VFHRKKNLQYYDISAKSNYNFEKPF 608
R V + F + NL + + SA N E+ F
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 78.2 bits (184), Expect = 2e-15
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 150 PTFKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAG 329
PT KCV+VG G GKT + S+ T F YV + + + + P ++DTAG
Sbjct: 2 PTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 330 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK 506
QE + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D++
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120
Query: 507 D 509
D
Sbjct: 121 D 121
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.5 bits (170), Expect = 1e-13
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K V++G G GKT + + F +Y A +G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE----GIPIVLCGNKVDIK 506
F L +Y C +I+++V + ++ +V NW ++ + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 507 DRKVKA----KTIVFHRKK---NLQYYDISAKSNYNFEKPFLWLAR 623
D +A + + + + K N+ +++ SAK N N F ++R
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 71.7 bits (168), Expect = 2e-13
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGP----IRFNVWDTA 326
K VL G GTGK+ ++ + ++ + +G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 327 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDI 503
GQEKF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 504 KD-RKVKAKTIV-FHRKKNL-QYYDISAKSNYNFEKPFLWLARKLI 632
++ R+V + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 71.3 bits (167), Expect = 2e-13
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Frame = +3
Query: 156 FKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQE 335
+K V+VG GG GK+ + F +Y + G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKD 509
++ +R+ Y G+ ++++++TSR ++ + +++ ++RV + P+VL NK D++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 510 RKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 629
+V +A+ + + Y + SAK N E+ F L R +
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 66.9 bits (156), Expect = 5e-12
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 335
K V+VG GG GKT + +G F +YV + + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI-KD 509
++ LR Y ++ F + + NV W+ ++ C PIVL G K D+ KD
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 510 R 512
R
Sbjct: 136 R 136
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 62.9 bits (146), Expect = 8e-11
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K V+VG G GKT+ + G F +YV + E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKDRK 515
+ LR Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 516 V 518
V
Sbjct: 129 V 129
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 61.7 bits (143), Expect = 2e-10
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K V+VG G GKT + G F YV + E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 509
+ LR Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 60.5 bits (140), Expect = 4e-10
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 335
K V++G G GKT+ + G F Y + +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 336 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK-- 506
++ LR Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 507 -DRKVKAKTIVFH-------RKKN-LQYYDISAKSNYNFEKPFLWLAR 623
+ +V I+ + +K N ++Y + SAK N + F AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 56.8 bits (131), Expect = 6e-09
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K V+VG G GKT + G F YV + E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 509
+ LR Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 54.8 bits (126), Expect = 2e-08
Identities = 28/116 (24%), Positives = 50/116 (43%)
Frame = +3
Query: 153 TFKCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQ 332
T K ++G GKT+ + +++ G F+ + LGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 333 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 500
+F + + MFD++ + T ++ W+R + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 37.5 bits (83), Expect = 0.004
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 335
K +L+G G+GK++ ++S + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 336 KF-----GGLRDGYYIQGQCAIIMFDVTSR 410
F RD + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 36.7 bits (81), Expect = 0.006
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 8/165 (4%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
+ +L+G GKTT +K L + G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVN-EVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGI---PIVLCGNKVDI-- 503
Y+ + I + D + + N ++L+ V E + I++ NK D+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVSG 131
Query: 504 ---KDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 629
+ K I ++ + + + +SA + N + WLA L
Sbjct: 132 ALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 35.9 bits (79), Expect = 0.011
Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
+ ++G+ GK++ ++ F Y + + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR--VCEGIPIVLCGNKVDI-KD 509
+ L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 510 RKVKAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 608
R V A+ + + + SA+ N N + F
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 34.3 bits (75), Expect = 0.034
Identities = 26/100 (26%), Positives = 41/100 (41%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
+ ++VG GKTT + G + +G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 339 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV 458
L Y+ Q I + D R + + H +L R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 30.7 bits (66), Expect = 0.41
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
+ +++G GKTT + L + +G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTILYK-LKLNQSVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 339 FGGLRDGYYIQGQCAIIMFD 398
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 165 VLVGAGGTGKTTFVK---SHLTGXFEXKYVAXLGVEVHPLVFHTN 290
++VG G+GKTTF++ +HL + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 654 VAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDED 770
+++P PP D + +E+D++D AL EDE+
Sbjct: 29 LSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDEE 67
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 27.5 bits (58), Expect = 3.9
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +3
Query: 159 KCVLVGAGGTGKTTFVKSHLTGXFEXKYVAXLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 338
K + +G GKTT + H+ + +A + +HP G +RF +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 339 FGGLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 500
L Y+ + + + D R++ + +P ++ GNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 404 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNW 297
G ++ D T + I+S + T + GC P+ KTNW
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNW 428
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 165 VLVGAGGTGKTTFVK 209
VL+G GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 684 VTMDPQWQNQIEKDLQDAQNTALPEED 764
VT + N+I K ++D +NT LP+ D
Sbjct: 112 VTEINEISNKIPKSIEDLENTLLPQAD 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,999,389
Number of Sequences: 5004
Number of extensions: 81290
Number of successful extensions: 287
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 637498240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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