Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F21
(1249 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 36 0.050
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 35 0.12
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 35 0.15
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.27
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.35
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.62
10_01_0274 - 2901033-2901778,2902475-2902634 31 2.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 2.5
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 3.3
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524... 30 4.4
11_01_0429 - 3288081-3288781,3290038-3290293 29 5.8
03_01_0515 - 3864796-3865425 29 7.6
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 36.3 bits (80), Expect = 0.050
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +2
Query: 512 GRXXPPQXXPPPXEGGGXXPGKXPPXKXGPRKXXPXXXXPXXPPXGGRXGXXTPNXRAXX 691
G PP PP G G G PP P P P G G P A
Sbjct: 299 GHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPA-- 356
Query: 692 XXXXGPXPPXXGXGXRAP 745
P PP G G P
Sbjct: 357 -APAAPRPPGPGPGPPPP 373
Score = 33.1 bits (72), Expect = 0.47
Identities = 27/101 (26%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Frame = +2
Query: 443 PXTXRPGPXQGXG-GXKXTXXGXXGRXXPPQXXPPPXEGGGXXPGKXPPXKXGPRKXXPX 619
P PG G G G PP P P G PP P P
Sbjct: 305 PHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPP 364
Query: 620 XXXPXXPPXGGRXGXXTPNXRAXXXXXXGPXPPXXGXGXRA 742
P PP G G GP PP G RA
Sbjct: 365 GPGPGPPPPPGAAG----------RGGGGPPPPALPGGPRA 395
Score = 32.3 bits (70), Expect = 0.82
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +3
Query: 564 PPPEXTPXXXGGXEXXXPGXXTPPXPXX-GAGXXXXPPTTXPAXXXXXGXXPXPXAXG 734
PPP P PG PP P G G PP P G P + G
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKKSPG 406
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/91 (26%), Positives = 28/91 (30%)
Frame = +2
Query: 524 PPQXXPPPXEGGGXXPGKXPPXKXGPRKXXPXXXXPXXPPXGGRXGXXTPNXRAXXXXXX 703
PP PPP G P PP P+ P P PP G G P+ +
Sbjct: 747 PPAPPPPPLMTGKKAPAPPPPPPQAPK---PPGTVPPPPPLHGASG--RPHPPSSKGLNA 801
Query: 704 GPXPPXXGXGXRAPXXGGXXXXXXKKXXRPP 796
PP G G A + PP
Sbjct: 802 PAPPPLLGRGREATGSAKGRGIGLAQQSNPP 832
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -2
Query: 684 ARXLGVXXPXRPPXGGXXGXXFXGXXFRGPXFXGGXFP--GXXPPPSXGGGXXCGGXXR 514
A+ G P R P GG G +G + G +P G PPP GGG G R
Sbjct: 421 AKPRGPGGPNRYPQGGNQGGYNPNRGGQGGGYGSGPYPQQGRGPPPYPGGGMGGAGGPR 479
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.27
Identities = 32/109 (29%), Positives = 34/109 (31%), Gaps = 10/109 (9%)
Frame = +2
Query: 458 PGPXQGXGGXKXTXXGXXGRXXPPQXXPPPXEGGGXXPGKXPPX--KXG--PRKXXPXXX 625
P P G GG + PPP G G P PP + G P
Sbjct: 1124 PPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVA 1183
Query: 626 XPXXPPXG--GRXGXXTPNXRAXXXXXXG----PXPPXXGXGXRAPXXG 754
P PP G G G TP G P PP G G AP G
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGG 1232
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +3
Query: 540 PPPXRXGXPPPEXTPXXXGGXEXXXPGXXTPPXPXXGAGXXXXPPTTXPAXXXXXGXXPX 719
PP G PPP P G PP P G G PP P G P
Sbjct: 1101 PPSIGAGAPPPPPPPGGITGVP--------PPPPIGGLGGHQAPPAP-PLPEGIGGVPPP 1151
Query: 720 PXAXGXXPP 746
P G P
Sbjct: 1152 PPVGGLGGP 1160
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.35
Identities = 30/93 (32%), Positives = 30/93 (32%), Gaps = 9/93 (9%)
Frame = -2
Query: 744 GARXPXPXXGGXGPXXXXXXARXLGVXXPXRPPXGGXXGXXFX--------GXXFRGPXF 589
GAR P P GG G G RPP GG G G R P
Sbjct: 129 GARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGG 188
Query: 588 XGGXF-PGXXPPPSXGGGXXCGGXXRPXXPXXV 493
GG PG P GGG GG P V
Sbjct: 189 GGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERV 221
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -2
Query: 681 RXLGVXXPXRPPXGGXXGXXFXGXXFRGPXFXGGXFPGXXPPPSXGGG 538
R L + PP GG G R P GG P PP + GGG
Sbjct: 81 RPLPIKLLGLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGG 128
Score = 30.7 bits (66), Expect = 2.5
Identities = 34/109 (31%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Frame = +2
Query: 458 PGPXQGXGGXKXTXXGXXGRXXPPQXXPPPXEGGGXXPGKXPPXKXG--PRKXXPXXXXP 631
PGP G GG + G G PP P GGG P G PR+
Sbjct: 98 PGPL-GGGGARPPGGGGGG--GPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGG 154
Query: 632 ---XXPPXGGRXG-XXTPNXRAXXXXXXGPXPPXXGXG---XRAPXXGG 757
PP GGR G P G P G G RAP GG
Sbjct: 155 GALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGG 203
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 742 GXXPXAXGXGXXPXXXXXAGXVVGGXXXXPAPXXGXGGVXXPGXXFSXPPLXWGVFSGGG 563
G P G G P G GG P G GG+ G P G GGG
Sbjct: 170 GRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGG 229
Query: 562 --XPXLXGGG 539
+ GGG
Sbjct: 230 GALKCVVGGG 239
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.62
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 540 PPPXRXGXPPPEXTPXXXGGXEXXXPGXXTPPXPXXGAGXXXXPPTTXP 686
PPP G PPP P G P +PP P G PP P
Sbjct: 337 PPPPPKGPPPP---PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 615 PGXXTPPXPXXGAGXXXXPPTTXPAXXXXXGXXPXPXAXGXXPP 746
P PP P A PP P G P P A G PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 5/79 (6%)
Frame = +2
Query: 524 PPQXXPPPXEGGGXXPGKXPPXKXGPRKXXPXXXXP-----XXPPXGGRXGXXTPNXRAX 688
P PPP + P PP K P P P PP G P
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 689 XXXXXGPXPPXXGXGXRAP 745
GP PP G P
Sbjct: 371 GGKKGGPPPPPPKGGASRP 389
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 540 PPPXRXGXPPPEXTPXXXGGXEXXXPGXXTPP-XPXXGAGXXXXPPTTXPAXXXXXGXXP 716
P G P PE P E P PP P G PP+T P P
Sbjct: 207 PADPGYGQPAPECPPPPTPAPECGQPAPEYPPSTPAYGTPAPECPPST-PEYGTPATACP 265
Query: 717 XPXAXGXXPP 746
P A G P
Sbjct: 266 PPTAPGYGSP 275
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 540 PPPXRXGXPPPEXTPXXXGGXEXXXPGXXTPPXPXXGAGXXXXPPTTXPAXXXXXGXXPX 719
PPP + PP P P PP P A PP T P P
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPP 142
Query: 720 P 722
P
Sbjct: 143 P 143
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +2
Query: 527 PQXXPPPXEGGGXXPGKXPPXKXGPRKXXPXXXXPXXPPXGGRXGXXTP 673
P PPP GG P PP GP + P P GG TP
Sbjct: 292 PPRIPPPPVGGTQPPPPPPPLANGPPR-----SIPPPPMTGGAMANFTP 335
Score = 29.5 bits (63), Expect = 5.8
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 503 GXXGRXXPPQXXPPPXEGGGXXPGKXPPXKXGPRKXXPXXXXPXXPPXGGRXGXXTPNXR 682
G R PPQ PPP P PP P P PP GG P
Sbjct: 262 GGPPRPPPPQVPPPP-------PQAPPPPPPNAPMGMPPRIPP--PPVGGTQPPPPPPPL 312
Query: 683 AXXXXXXGPXPPXXG 727
A P PP G
Sbjct: 313 ANGPPRSIPPPPMTG 327
Score = 29.1 bits (62), Expect = 7.6
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = -2
Query: 573 PGXXPPPSXGGGXX--CGGXXRPXXPXXVXFXPPXPCXGPGRXVXGFXXRVXXXXGXFXG 400
P PP+ G GG RP P P P P G R+
Sbjct: 245 PEANKPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQ 304
Query: 399 PPPFXWXFFXXPPXXXXPPP 340
PPP PP PPP
Sbjct: 305 PPPPPPPLANGPPRSIPPPP 324
>01_05_0669 -
24152057-24152110,24152224-24152308,24152401-24152486,
24153129-24154341,24154441-24154529,24154607-24154639,
24154674-24154859,24155290-24155380,24155588-24155622,
24155736-24155817,24155968-24156020,24156404-24156469,
24156752-24156820,24156821-24156984,24157925-24158432,
24158543-24158602
Length = 957
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +3
Query: 540 PPPXRXGXPPPEXTPXXXGGXEXXXPGXXTPPXPXXGAGXXXXPPTTXPAXXXXXGXXPX 719
PPP G PP+ P G P P PP P P
Sbjct: 75 PPPSLYGYAPPQPPPALYGAVPYNYGHPQQPGPPYGAVPYNYGPPPPQPQDPQYGYATPN 134
Query: 720 PXAXGXXPP 746
P G P
Sbjct: 135 PYVQGHPQP 143
>11_01_0429 - 3288081-3288781,3290038-3290293
Length = 318
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/62 (27%), Positives = 21/62 (33%)
Frame = -1
Query: 742 GXXPXAXGXGXXPXXXXXAGXVVGGXXXXPAPXXGXGGVXXPGXXFSXPPLXWGVFSGGG 563
G + G P AG +GG A GG G S PP+ W + G
Sbjct: 251 GASSSSSGQSSFPLFYSFAGHELGGNEANLARPPESGGAGGDGGRGSSPPVTWPGYGWGA 310
Query: 562 XP 557
P
Sbjct: 311 PP 312
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/68 (23%), Positives = 17/68 (25%)
Frame = +3
Query: 543 PPXRXGXPPPEXTPXXXGGXEXXXPGXXTPPXPXXGAGXXXXPPTTXPAXXXXXGXXPXP 722
PP PP P G PP P + PP P P P
Sbjct: 42 PPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP 101
Query: 723 XAXGXXPP 746
PP
Sbjct: 102 PPPSPPPP 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.145 0.483
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,574,501
Number of Sequences: 37544
Number of extensions: 354003
Number of successful extensions: 1434
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3852724812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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