Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F19
         (1251 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   2.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   2.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   2.7  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   8.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   8.3  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 755 IDLWDKY*EQLDVYREFLSNSKYLI 829
           I LW  +  Q DV  ++LS ++Y+I
Sbjct: 434 IILWTSHLTQADVIEKYLSKARYVI 458


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 355 GAPIIPISAQLKYNIEVLCEYITKKIPVPLRDFTSPPRMIVIRSF 489
           GA +  I+ Q ++NIE+    ++    +P+  +TS  ++  +R F
Sbjct: 262 GAFLYTINGQGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFLRGF 306


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 352 EGAPIIPISAQLKYNIEVLCEYITKKIPVP 441
           EG   +P + +  YNI+   EY T  +P+P
Sbjct: 46  EGKVQVPEALKKIYNIQNNFEYDTASLPLP 75


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 354 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 259
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 603 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 636


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 354 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 259
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 836 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 354 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 259
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 836 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 167 HYYSLRATNLAHSPKLVNT 223
           HYY L   +   +PK+VN+
Sbjct: 3   HYYRLSLKSRQKAPKIVNS 21


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 167 HYYSLRATNLAHSPKLVNT 223
           HYY L   +   +PK+VN+
Sbjct: 3   HYYRLSLKSRQKAPKIVNS 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,794
Number of Sequences: 336
Number of extensions: 5622
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36685677
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)