Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F19
(1251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 507 e-144
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 68 2e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 67 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 67 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 67 2e-11
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 58 1e-08
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 58 1e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 42 0.001
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 42 0.001
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 38 0.020
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 38 0.020
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.24
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.56
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.3
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 31 1.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 1.3
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 9.1
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 507 bits (1251), Expect = e-144
Identities = 233/309 (75%), Positives = 272/309 (88%)
Frame = +1
Query: 40 FPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSE 219
FPC R C G F VRHVSFVDCPGHDILMATMLNGAAVMDAA LL+AGNE CPQPQTSE
Sbjct: 112 FPCERAGCGGEFTCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEPCPQPQTSE 171
Query: 220 HLAAIEIMKLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNI 399
HLAA+EIM+L H++ILQNK+D++KE QA+E +EQI FVQGTVAE AP+IPISAQLKYN+
Sbjct: 172 HLAAVEIMQLNHLMILQNKVDIIKESQARENYEQIAGFVQGTVAENAPVIPISAQLKYNV 231
Query: 400 EVLCEYITKKIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGM 579
+++CEY+ KKIPVP+RDF SP R+I+IRSFDVNKPG EV++L+GGVAGG++ +G+L VG
Sbjct: 232 DLVCEYLCKKIPVPVRDFKSPARLIIIRSFDVNKPGSEVENLKGGVAGGTLTKGILRVGQ 291
Query: 580 EIEVRPGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIEPTLCRADR 759
EIEVRPG+VSK A G+L CRPIFSRI SLFAE+N+L+YAVPGGLIGVGTKI+PTLCR DR
Sbjct: 292 EIEVRPGIVSKTATGQLQCRPIFSRIDSLFAEKNQLEYAVPGGLIGVGTKIDPTLCRGDR 351
Query: 760 LVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIGSLS 939
LVG +LGAVG LP IF+++E+S+YLL+RLLGVRTEG KK AKVQKLVK E LLVNIGSLS
Sbjct: 352 LVGHILGAVGTLPDIFIEIEISFYLLRRLLGVRTEGKKKGAKVQKLVKEETLLVNIGSLS 411
Query: 940 TGGRXIATK 966
TGGR A K
Sbjct: 412 TGGRVTAVK 420
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 67.7 bits (158), Expect = 2e-11
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILI 264
R ++ +DCPGH L+ +L + V D A+++I QPQT+EHL ++I
Sbjct: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI-QPQTAEHLLLASKFCPNRVII 130
Query: 265 LQNKIDLVKEGQAKEQHEQIVKFVQGT-VAEGAPIIPISAQLKYNIEVLCEYITKKIPVP 441
+ NK DL ++ + E +++ K ++ V E +PI+ +S Y E + + + K+ +
Sbjct: 131 VLNKCDLAEKSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNL--KLAIE 188
Query: 442 LRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSK 612
R F P+ F + C +G V G++++GVL + EIE P L K
Sbjct: 189 SRIF--EPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF-PALNEK 242
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 67.3 bits (157), Expect = 2e-11
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLA-AIEI-MKLKHI 258
RH + +DCPGH + M+ GAA M+ A+L++A + P PQT EHL A ++ + L +I
Sbjct: 112 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG-PMPQTREHLLLARQVGVPLDNI 170
Query: 259 LILQNKIDLVKEGQAKEQ-----HEQIVKFVQGTVAEGAPIIPISAQLKYN---IEVLCE 414
++ NK+D V + + +E EQ+ +F G + P+I SA E+ E
Sbjct: 171 VVFMNKVDEVPDAETRELVEMDIREQLNEF--GYPGDTCPVIFGSALCALEGKQPEIGEE 228
Query: 415 YITKKIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVR 594
+ + + V F P R + + + RG V G + +G+L G +IE+
Sbjct: 229 AVKQLLEVLDNKFVIPERKVNEEPMFAAEHVYSIVG-RGTVITGKLERGILKRGDKIEIV 287
Query: 595 PGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGV 720
G +KD T + + S + S + + A PG +GV
Sbjct: 288 GG--TKDG---TTVKSVISGLESF---RKTVDQAEPGDQLGV 321
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 67.3 bits (157), Expect = 2e-11
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLA-AIEI-MKLKHI 258
RH + +DCPGH + M+ GAA M+ A+L++A + P PQT EHL A ++ + L +I
Sbjct: 113 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG-PMPQTREHLLLARQVGVPLDNI 171
Query: 259 LILQNKIDLVKEGQAKEQ-----HEQIVKFVQGTVAEGAPIIPISAQLKYN---IEVLCE 414
++ NK+D V + + +E EQ+ +F G + P+I SA E+ E
Sbjct: 172 VVFMNKVDEVPDAETRELVEMDIREQLNEF--GYPGDTCPVIFGSALCALEGKQPEIGEE 229
Query: 415 YITKKIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVR 594
+ + + V F P R + + + RG V G + +G+L G +IE+
Sbjct: 230 AVKQLLEVLDNKFVIPERKVNEEPMFAAEHVYSIVG-RGTVITGKLERGILKRGDKIEIV 288
Query: 595 PGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGV 720
G +KD T + + S + S + + A PG +GV
Sbjct: 289 GG--TKDG---TTVKSVISGLESF---RKTVDQAEPGDQLGV 322
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 67.3 bits (157), Expect = 2e-11
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLA-AIEI-MKLKHI 258
RH + +DCPGH + M+ GAA M+ A+L++A + P PQT EHL A ++ + L +I
Sbjct: 113 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG-PMPQTREHLLLARQVGVPLDNI 171
Query: 259 LILQNKIDLVKEGQAKEQ-----HEQIVKFVQGTVAEGAPIIPISAQLKYN---IEVLCE 414
++ NK+D V + + +E EQ+ +F G + P+I SA E+ E
Sbjct: 172 VVFMNKVDEVPDAETRELVEMDIREQLNEF--GYPGDTCPVIFGSALCALEGKQPEIGEE 229
Query: 415 YITKKIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVR 594
+ + + V F P R + + + RG V G + +G+L G +IE+
Sbjct: 230 AVKQLLEVLDNKFVIPERKVNEEPMFAAEHVYSIVG-RGTVITGKLERGILKRGDKIEIV 288
Query: 595 PGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGV 720
G +KD T + + S + S + + A PG +GV
Sbjct: 289 GG--TKDG---TTVKSVISGLESF---RKTVDQAEPGDQLGV 322
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.0 bits (134), Expect = 1e-08
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Frame = +1
Query: 82 VRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIL 261
+R S DCPGH + M+ G + MD A+L+IA + + QT EHL + + +K++
Sbjct: 107 LRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-QTKEHLILAKQVGVKNMA 165
Query: 262 ILQNKIDLVKEGQAK--EQHEQIVKFVQGTVAEGAPII---PISAQLKYNIEVLCEYITK 426
I NK DLV+E E + + + G + P+I +SA +I + I
Sbjct: 166 IFINKADLVEEDDLDLVEMEARELLSLHGFNGDATPVIRGSALSALEGQDISCIERLIDA 225
Query: 427 KIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVR 594
+P D ++ + G RG V G++ +GVL G ++E++
Sbjct: 226 LDSLPEPDRNEKDTFVMPIASKTAITG------RGTVIVGTLERGVLKKGDKVEIK 275
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.0 bits (134), Expect = 1e-08
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Frame = +1
Query: 82 VRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIL 261
+R S DCPGH + M+ G + MD A+L+IA + + QT EHL + + +K++
Sbjct: 107 LRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-QTKEHLILAKQVGVKNMA 165
Query: 262 ILQNKIDLVKEGQAK--EQHEQIVKFVQGTVAEGAPII---PISAQLKYNIEVLCEYITK 426
I NK DLV+E E + + + G + P+I +SA +I + I
Sbjct: 166 IFINKADLVEEDDLDLVEMEARELLSLHGFNGDATPVIRGSALSALEGQDISCIERLIDA 225
Query: 427 KIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVR 594
+P D ++ + G RG V G++ +GVL G ++E++
Sbjct: 226 LDSLPEPDRNEKDTFVMPIASKTAITG------RGTVIVGTLERGVLKKGDKVEIK 275
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/166 (25%), Positives = 71/166 (42%)
Frame = +1
Query: 91 VSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQ 270
++ +D PGH A + AV D LLL+A N+ + A E K I+ +
Sbjct: 104 LNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFE--KNIQIIPVI 161
Query: 271 NKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLRD 450
NKIDL K Q+ + E + ISA+ N++ + E I ++P P
Sbjct: 162 NKIDL-PGADIKSVETQLKNLFEFNPEE---CLHISAKSGLNVDKVLEAIIDRVPAPTAI 217
Query: 451 FTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIE 588
+P R ++ S+ D RG +A + +G + G +I+
Sbjct: 218 IDAPFRSMIFDSY--------FDHFRGAIAHIMVKEGSVKKGDKIQ 255
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP------QTSEHLAAIEIMK 246
RH + +D PGH + M+ GA D A+L+I+ + QT EH ++
Sbjct: 187 RHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAG 246
Query: 247 LKHILILQNKID 282
+KH++IL NK+D
Sbjct: 247 VKHLVILVNKMD 258
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 88 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 249
+++ +D PGH + M+ G + D A+L++A QT EH + + +
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 250 KHILILQNKIDLVKEGQAKEQHEQIVKFVQGTV------AEGAPIIPIS 378
K +++ NK+D + ++ + +I V G + + P +PIS
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPIS 194
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 88 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 249
+++ +D PGH + M+ G + D A+L++A QT EH + + +
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 250 KHILILQNKIDLVKEGQAKEQHEQIVKFVQGTV------AEGAPIIPIS 378
K +++ NK+D + ++ + +I V G + + P +PIS
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPIS 194
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 37.5 bits (83), Expect = 0.020
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP------QTSEHLAAIEIMK 246
R + +D PGH ++ M+ G + DAA+L++ + QT EH + +
Sbjct: 248 RRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 307
Query: 247 LKHILILQNKIDLVKEGQ 300
+ +++ NK+D V Q
Sbjct: 308 VTQLIVAVNKLDTVDWSQ 325
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.020
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQP------QTSEHLAAIEIMK 246
R + +D PGH ++ M+ G + DAA+L++ + QT EH + +
Sbjct: 266 RRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 325
Query: 247 LKHILILQNKIDLVKEGQ 300
+ +++ NK+D V Q
Sbjct: 326 VTQLIVAVNKLDTVDWSQ 343
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILI 264
R V+F+D PGH + GA D +L++A ++ + QT++ + + ++ +++
Sbjct: 204 RRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-QTAQSIKFAKDANVQ-LVV 261
Query: 265 LQNKID 282
NKID
Sbjct: 262 AVNKID 267
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.56
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE-SCPQPQTSE 219
+++ +D PGH + M+ G + D A+L++A N+ +P SE
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACNKMDSTEPPFSE 130
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 85 RHVSFVDCPGHDILMATMLNGAAVMDAALLL 177
R ++ +DCPGH L+ +L + V D A+++
Sbjct: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVI 102
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 88 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 249
+++ +D PGH + M+ G + D A+L++A QT EH + + +
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 250 KHILILQN 273
K ++ L++
Sbjct: 146 KQLVSLRS 153
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 100 VDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKI 279
+D PGH+ G+++ D A+L++ +PQT E L + K ++ L NKI
Sbjct: 554 IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGL-EPQTIESLKLLIKGKTPFVIAL-NKI 611
Query: 280 DLVKEGQAKEQHE 318
D + E ++ + +
Sbjct: 612 DRLYEYESNPRKD 624
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 91 VSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES-CPQPQTSEHLAAIEIMKLKHILIL 267
++ +D PGH + + + D ALLLI E C Q +E L I + ++++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQ---TEALIRQVIRNGQAMILV 141
Query: 268 QNKIDLVK---EGQAKEQHEQIVKFVQG 342
NKID ++ + + E ++ + + ++G
Sbjct: 142 INKIDRLRVELKMSSSEAYQHMSRLIEG 169
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 91 VSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES-CPQPQTSEHLAAIEIMKLKHILIL 267
++ +D PGH + + + D ALLLI E C Q +E L I + ++++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQ---TEALIRQVIRNGQAMILV 141
Query: 268 QNKIDLVK---EGQAKEQHEQIVKFVQG 342
NKID ++ + + E ++ + + ++G
Sbjct: 142 INKIDRLRVELKMSSSEAYQHMSRLIEG 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,755,773
Number of Sequences: 27780
Number of extensions: 514317
Number of successful extensions: 1326
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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