Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F18
(1253 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 244 5e-63
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 2e-27
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 104 4e-21
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 101 5e-20
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 100 9e-20
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 85 3e-15
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 5e-13
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 71 6e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 5e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-07
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 47 0.001
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.077
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.13
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 39 0.24
UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;... 37 0.95
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 35 3.8
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 5.1
UniRef50_Q0V5U9 Cluster: Putative uncharacterized protein; n=2; ... 35 5.1
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 8.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 244 bits (596), Expect = 5e-63
Identities = 113/122 (92%), Positives = 114/122 (93%)
Frame = +2
Query: 467 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 646
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 647 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 826
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 827 TR 832
TR
Sbjct: 122 TR 123
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 2e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +2
Query: 299 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 478
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 479 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 658
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 104 bits (250), Expect = 4e-21
Identities = 56/103 (54%), Positives = 60/103 (58%)
Frame = +2
Query: 560 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 739
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 740 SFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*TRLIATGSSHW 868
SFAPSWAV NPPFSPTAAPYPVT+ LSPTR + ATGSSHW
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 101 bits (241), Expect = 5e-20
Identities = 44/57 (77%), Positives = 46/57 (80%)
Frame = +3
Query: 828 PGRHDLSPLAAATGNRIXXXRYVGGATXFLKWWPNYGYTKKTXXGICXLLXPXTFXK 998
P RHDLSPLAAATGNRI RYVGGAT FLKWWPNYGYT++T GIC LL P TF K
Sbjct: 23 PVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGK 79
Score = 57.6 bits (133), Expect = 6e-07
Identities = 28/42 (66%), Positives = 29/42 (69%)
Frame = +1
Query: 763 VHEPPVQPDRCALSGNYRLESNPVDTTYRHWQQPLVTGLXXR 888
+HEPPVQPDRCALSGNYRLESNPV RH PL R
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPV----RHDLSPLAAATGNR 38
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 100 bits (239), Expect = 9e-20
Identities = 48/75 (64%), Positives = 56/75 (74%)
Frame = -2
Query: 832 PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR* 653
PGWTQDDSYR RS RAERGVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV-- 65
Query: 652 AAGSEQESARGSFQG 608
+G Q R + +G
Sbjct: 66 -SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 678 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 559
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 485 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 646
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 85.4 bits (202), Expect = 3e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 844 KSCLPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 728
+ LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN
Sbjct: 4 RRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 5e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 625 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 735
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 70.9 bits (166), Expect = 6e-11
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = -2
Query: 832 PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DT 719
PGWTQ +SYRIRRS RAERGV A+SPAWSERPTP+ DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 475 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 362
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 275 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 442
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 5e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 374 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 547
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 548 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 646
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 46.8 bits (106), Expect = 0.001
Identities = 33/67 (49%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 998 FXEGXWXQQXADTXXCFFSVAVVRPPLQEXCST-----AYIPRXXNPVTSGCCQWR*VVS 834
F EG W QQ ADT C SVAVV P LQE CST A + R SG
Sbjct: 34 FSEGNWLQQSADTKYCPSSVAVVGPLLQELCSTVCAIIALLIRLPVAAASGVK----ACL 89
Query: 833 TGLDSRR 813
TGLDSRR
Sbjct: 90 TGLDSRR 96
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 394 HSKAVIRLSTESGDNAGKNM 453
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.077
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 273 SALMNRPTRGERRFAYW 323
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.13
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 345 ERGSGRAPNTQTASPRALADSLMQ 274
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 39.1 bits (87), Expect = 0.24
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 764 CTNPPFSPTAAPYPVTIVLSPTR*TRLIATGSSHW 868
CTN PFSPT P VT++L+PT L T HW
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPT----LTDTQKRHW 98
>UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 198
Score = 37.1 bits (82), Expect = 0.95
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 829 GWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTG 662
GW + + + R GR +R R +PAW P D+ V+ + PR P RR G
Sbjct: 143 GWPRAEVVEVGRLGRGQRARRRDAPAWVRPREPRSDSSPVT-GRGPRAPSPTRRPG 197
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.1 bits (77), Expect = 3.8
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +2
Query: 560 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 739
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 740 SFAPSWAVCTNPPFSPTAAPYP 805
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 5.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 705 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 601
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q0V5U9 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 505
Score = 34.7 bits (76), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 907 VAPPTYLXXXILLPVAAASGDKSCLPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 731
VAP T+ +L A D+S GW+ D + + G+ + +AH W+ +P
Sbjct: 236 VAPGTHCSTLFILNKVAPFADRSIPGGWSDLDMLEVGQGGQTDEEYKAHFALWAAIKSP 294
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 8.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 484 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 362
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 976,972,572
Number of Sequences: 1657284
Number of extensions: 20399168
Number of successful extensions: 57600
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 53913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57544
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127150142326
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -