Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F16
         (1390 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   2.3  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   7.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   9.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 461 FIEMAREM-GSRHNSAELAGTRSSRKTLSQRQHGLRQGRLTSDNCSIRR 604
           F E+++ + G   N A+     +  +TL+     +  GR+T  +CS +R
Sbjct: 741 FTELSKSLEGLLENVAQYLQIENVEQTLNHEIKKVIPGRITQKSCSTKR 789


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 429  DPQAAEXMLRDSLKWREKWEVDTTLPSWQAPEVLEKHFPSGSTGFDKE 572
            DPQA    +   L + E+W  D     W+ P+  +     G    DKE
Sbjct: 2415 DPQARAAFIAHVLAFIEEWNFDGLDLDWEYPKCWQVDCNKGPDS-DKE 2461



 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 429  DPQAAEXMLRDSLKWREKWEVDTTLPSWQAPE 524
            +P A    ++  L++ EKW  D     W+ P+
Sbjct: 1492 NPAARARFIKHVLQFLEKWNFDGLDLDWEYPK 1523



 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 1150 KXPGEKPXXXXXXXPXKPGXKXP 1218
            K PG KP       P KP  + P
Sbjct: 1155 KKPGHKPSTSSWQKPTKPSYRPP 1177


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 529 RTSGACQLGRVVSTSHFSRHFNESLNXFSAACGSH 425
           +T G   L ++    +FS  F E +     A G+H
Sbjct: 123 KTQGISHLDKLQLGQYFSPWFAEHMGQIKVASGNH 157


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 519 PEVLEKHFPSGSTGFDKEGSPVIIVPFVGLDVWG 620
           P+V E + P+ ++G  +      +VP +   +WG
Sbjct: 664 PKVYEDYCPTSNSGSVRMSHLGTLVPLILFMLWG 697


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,118
Number of Sequences: 336
Number of extensions: 4049
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 41412683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)