Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F16
(1390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 90 3e-18
Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical pr... 78 1e-14
Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical pr... 53 4e-07
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 51 2e-06
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 38 0.017
U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical p... 34 0.21
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 34 0.21
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 31 1.5
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 31 1.5
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 29 5.9
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 29 5.9
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 29 5.9
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 90.2 bits (214), Expect = 3e-18
Identities = 49/159 (30%), Positives = 84/159 (52%)
Frame = +3
Query: 387 NDHXLLRWLRARQWDPQAAEXMLRDSLKWREKWEVDTTLPSWQAPEVLEKHFPSGSTGFD 566
ND LLR+LRAR +D A+ M+ S+ WR++ VD L W P V++++FP D
Sbjct: 276 NDAHLLRFLRARDFDVAKAKDMVHASIIWRKQHNVDKILEEWTRPTVIKQYFPGCWHNSD 335
Query: 567 KEGSPVIIVPFVGLDVWGLLHSFTRXEVIRMILKHXENYLAIARKQALTHGPDALKVTVI 746
K G P+ I+ F LD G+L S ++++ L E+ L A + G +++
Sbjct: 336 KAGRPMYILRFGQLDTKGMLRSCGVENLVKLTLSICEDGLQRAAEATRKLGTPISSWSLV 395
Query: 747 FDLEGXXIRQYAWKPXAEMVFTLLKLXEAXLPXDXEELL 863
DL+G +R + W+P + + ++++ EA P ++L
Sbjct: 396 VDLDGLSMR-HLWRPGVQCLLKIIEIVEANYPETMGQVL 433
>Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical
protein H06O01.3 protein.
Length = 383
Score = 78.2 bits (184), Expect = 1e-14
Identities = 47/159 (29%), Positives = 76/159 (47%)
Frame = +3
Query: 387 NDHXLLRWLRARQWDPQAAEXMLRDSLKWREKWEVDTTLPSWQAPEVLEKHFPSGSTGFD 566
ND +LRWLRA++ L+ + +R W +D + W PE LEK+ G G D
Sbjct: 31 NDGYVLRWLRAKEGRFDETAESLKKHVTFRNAWHLDK-IEQWTPPECLEKYCGYGLLG-D 88
Query: 567 KEGSPVIIVPFVGLDVWGLLHSFTRXEVIRMILKHXENYLAIARKQALTHGPDALKVTVI 746
EG P+++ +DV GLL S + I+ L E + + ++A G ++T++
Sbjct: 89 TEGRPILMSLLGNVDVEGLLRSVASLDYIKFSLAAIEKGMKLCEEKAKESGRPFEQMTLV 148
Query: 747 FDLEGXXIRQYAWKPXAEMVFTLLKLXEAXLPXDXEELL 863
FDLE ++ K A TL+ L + P ++L
Sbjct: 149 FDLENITSAHFSCKQFASSFTTLVSLFQDHYPLFLRKIL 187
>Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical
protein F20G2.3 protein.
Length = 377
Score = 53.2 bits (122), Expect = 4e-07
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 309 VGIDDDXRFALMKFRRSVKDVLRPEHN-DHXLLRWLRARQWDPQAAEXMLRDSLKWREK- 482
+ I + R A+ + R +VK+ L P ++ D LLRWL+ + + L + L +R+
Sbjct: 1 MSISESDRVAINELREAVKEHLTPYYDTDFNLLRWLKGHDYKMDVIKPKLINHLLFRKSD 60
Query: 483 WEVDTTLPSWQAPEVLEKHFPSGSTGFDKE-GSPVIIVPFVGL-DVWGLLHSFTRXEVIR 656
W++D+ L + H+ +G TG + ++ + G D WG+LHS+ E++R
Sbjct: 61 WDLDS-LADKPRDHPVHHHWKTGLTGESGIIPNTIVNIEQTGSNDYWGMLHSYPTNEILR 119
Query: 657 MILKHXENYL-AIARKQALTHGPDALKVTVIFDLEG 761
+ E+ L A+ + T+ V I DL G
Sbjct: 120 ARVHDLESMLKAVMDLEKKTN--QQCSVIYIMDLTG 153
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Frame = +3
Query: 285 MAPMSNAVVGIDDDXRFALMKFRRSVKDVLRPEHNDHX-LLRWLRARQWDPQAAEXMLRD 461
MAP + + V I++ A+ + R V DV+ P ++ +LRWL++ ++ +L+
Sbjct: 1 MAPNALSPVDIENMNDAAIEQVRLQVSDVIDPRYDTKWNMLRWLQSNDFNIPKTVHLLKK 60
Query: 462 SLKWREKWEVD--TTLPSWQAPEVLEKHFPSGSTGFDK--EGSPVIIVPFVG-LDVWGLL 626
LKWR+ ++D + Q + KH P G + +G +++V G +DV GL+
Sbjct: 61 HLKWRKDRKLDEPESQSLLQFSDARRKHAPIDIIGPQRKEDGDRLVVVDRAGRIDVSGLM 120
Query: 627 HSFTRXEVIRMILKHXENYLAIARKQALTHGPDALKVTVIFDLE 758
S E + + + E K G + IFDLE
Sbjct: 121 KSVQPTEYLHEMFRSFEEIQRRLMKMEAETGVQCY-MHYIFDLE 163
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.017
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 534 KHFPSGSTGFDKEGSPVIIVPFVGLDVWGLLHSFTRXEVIRMILKHXENYLAIARKQALT 713
++ P G D E + V + LD GL+ + ++ RM + E + I RK
Sbjct: 104 RYLPGSLIGLDHENNVVSLQMIGHLDAAGLMPATRNSDLYRMRIAESEGVMQIIRKMEKE 163
Query: 714 HGPDALKVTVIFDLEGXXIRQ 776
G L +VIFDL+G + Q
Sbjct: 164 QG-KPLGTSVIFDLDGLSMVQ 183
>U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical
protein B0336.11b protein.
Length = 275
Score = 34.3 bits (75), Expect = 0.21
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 366 DVLRPEHNDHXLLRWLRARQWDPQAAEXMLRDSLKWREKWEVD 494
DV R H D L R+L + +D A ++ + LKWR +EVD
Sbjct: 48 DVHRIRHEDWWLDRFLGSVNYDVDIAYAIMLECLKWRRNFEVD 90
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 34.3 bits (75), Expect = 0.21
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 366 DVLRPEHNDHXLLRWLRARQWDPQAAEXMLRDSLKWREKWEVD 494
DV R H D L R+L + +D A ++ + LKWR +EVD
Sbjct: 48 DVHRIRHEDWWLDRFLGSVNYDVDIAYAIMLECLKWRRNFEVD 90
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 684 GSSPNVSKSFE*LXSW*RSAVDPTHPDRRMEQLSLVSLP 568
G + +S+E L + +S VDP PD R++Q+ + +LP
Sbjct: 1069 GENGGYGRSYESLRAIEQSVVDPRSPDYRLKQVKISALP 1107
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 684 GSSPNVSKSFE*LXSW*RSAVDPTHPDRRMEQLSLVSLP 568
G + +S+E L + +S VDP PD R++Q+ + +LP
Sbjct: 1069 GENGGYGRSYESLRAIEQSVVDPRSPDYRLKQVKISALP 1107
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 273 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 329
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 330 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 373
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 277 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 333
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 334 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 377
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 335 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 391
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 392 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 435
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 293 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 349
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 350 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 393
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 301 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 357
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 358 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 401
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 273 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 329
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 330 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 373
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 277 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 333
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 334 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 377
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 335 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 391
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 392 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 435
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 293 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 349
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 350 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 393
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 301 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 357
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 358 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 401
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = -1
Query: 640 LVKECSRPHTSRPTNGTIITGEPSL-SKPVLPLGKCFSRTSGACQLGRVVSTSHFSRHFN 464
L K+ ++P+TS TNGTI TG P+L S+ V L S T + G V +T+ + F
Sbjct: 263 LSKQLAQPYTS--TNGTIPTGGPTLKSRYVTSLYFTLS-TITSIGFGNVSATTDSEKIFT 319
Query: 463 ESL----NXFSAACGSHCRALNHLNKXWSLCSGLNTSLTLLRNFIR 338
+ + A+ + A+ + + +S + +T ++ LR FIR
Sbjct: 320 IIMMILGSLMYASVFGNVSAI--IQRLYSGTARYHTEMSRLREFIR 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,844,312
Number of Sequences: 27780
Number of extensions: 411385
Number of successful extensions: 854
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3933724284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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