Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F11
(1302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 405 e-112
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 405 e-112
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 400 e-111
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 77 2e-13
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 77 2e-13
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 71 1e-11
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 71 1e-11
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 71 1e-11
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 71 1e-11
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 71 1e-11
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 66 3e-10
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 38 0.061
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 38 0.061
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 38 0.061
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 38 0.061
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 38 0.061
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 38 0.061
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 38 0.080
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 38 0.080
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 38 0.080
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 38 0.080
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 405 bits (996), Expect = e-112
Identities = 187/245 (76%), Positives = 211/245 (86%)
Frame = +2
Query: 233 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 412
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 413 GMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 592
GMFKKVNARE++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 593 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRITNQLLGLK 772
+VEEVHDDGTPTS+TFEHV SEI HLLRDIKDTTVG+LSQRITNQ+ GLK
Sbjct: 140 SVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLK 199
Query: 773 GLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLV 952
GL+S+L +IR YL +V G LP+NHQIIYQLQD+FNLLPD++ F+ Y+KTNDQ +V
Sbjct: 200 GLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVV 259
Query: 953 VYXAA 967
VY A+
Sbjct: 260 VYLAS 264
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 405 bits (996), Expect = e-112
Identities = 187/245 (76%), Positives = 211/245 (86%)
Frame = +2
Query: 233 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 412
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 413 GMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 592
GMFKKVNARE++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 593 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRITNQLLGLK 772
+VEEVHDDGTPTS+TFEHV SEI HLLRDIKDTTVG+LSQRITNQ+ GLK
Sbjct: 140 SVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLK 199
Query: 773 GLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLV 952
GL+S+L +IR YL +V G LP+NHQIIYQLQD+FNLLPD++ F+ Y+KTNDQ +V
Sbjct: 200 GLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVV 259
Query: 953 VYXAA 967
VY A+
Sbjct: 260 VYLAS 264
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 400 bits (985), Expect = e-111
Identities = 186/245 (75%), Positives = 210/245 (85%)
Frame = +2
Query: 233 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 412
DHFNR+ K+GNQKRVVGVLLG W+ K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMY
Sbjct: 21 DHFNRIVKVGNQKRVVGVLLGSWQKK-VLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMY 79
Query: 413 GMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQ 592
GMFKKVNARE++VGWYHTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY
Sbjct: 80 GMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYI 139
Query: 593 AVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRITNQLLGLK 772
+VEE DDGTPTS+TFEHV SEI HLLRDIKDTTVG+LSQRITNQ+ GLK
Sbjct: 140 SVEEDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLK 199
Query: 773 GLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLV 952
GL+S+L +IR YL +VG G LP+NHQIIYQLQD+FNLLPD++ F+ Y+KTNDQ +V
Sbjct: 200 GLNSKLLDIRSYLEKVGTGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVV 259
Query: 953 VYXAA 967
VY A+
Sbjct: 260 VYLAS 264
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 76.6 bits (180), Expect = 2e-13
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Frame = +2
Query: 233 DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENM 409
DH+ RM S+ G +V+G L+G + + +V NSF + ++K + +D +Y
Sbjct: 23 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 78
Query: 410 YGMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 589
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 79 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 138
Query: 590 QAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVG---SLSQRITNQL 760
++V ++ + G T F + + H+ R + T G ++++ + Q
Sbjct: 139 ESVIDIIN-GEATM-LFAELTYTLATEEAERIGVDHVAR-MTATGSGENSTVAEHLIAQH 195
Query: 761 LGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTND 940
+K LHS++ I +Y+ G +P NH+I+ + + + LP ++ D F + Y + ND
Sbjct: 196 SAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCND 255
Query: 941 QSLVVY 958
L+ Y
Sbjct: 256 VGLMAY 261
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 76.6 bits (180), Expect = 2e-13
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Frame = +2
Query: 233 DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENM 409
DH+ RM S+ G +V+G L+G + + +V NSF + ++K + +D +Y
Sbjct: 53 DHWIRMRSQEGRPVQVIGALIGKQEGRNI-EVMNSFEL-LSHTVEEKII--IDKEYYYTK 108
Query: 410 YGMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 589
FK+V + +GWY TG +DI +++ + + + + ++ K LP +
Sbjct: 109 EEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF 168
Query: 590 QAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVG---SLSQRITNQL 760
++V ++ + G T F + + H+ R + T G ++++ + Q
Sbjct: 169 ESVIDIIN-GEATM-LFAELTYTLATEEAERIGVDHVAR-MTATGSGENSTVAEHLIAQH 225
Query: 761 LGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTND 940
+K LHS++ I +Y+ G +P NH+I+ + + + LP ++ D F + Y + ND
Sbjct: 226 SAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCND 285
Query: 941 QSLVVY 958
L+ Y
Sbjct: 286 VGLMAY 291
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 70.5 bits (165), Expect = 1e-11
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Frame = +2
Query: 272 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVV 451
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 452 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTS 631
GWY TG + ++ + I+E R PN + + +D ++ + +AY + + G
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVST-LMGVPGRTMG 229
Query: 632 RTFEHVPSEIXXXXXXXXXXXHLLRD-IKDTTVGSLSQRITNQLLGLKG-LHSQLTEIRD 805
F + + +++ V LS + Q+ G + L+ +
Sbjct: 230 VMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDL-QQVGGASARIQDALSTVLQ 288
Query: 806 YLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLVVYXA 964
Y V G + ++ + L + N +P I D+F ND +V Y A
Sbjct: 289 YAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLA 341
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 70.5 bits (165), Expect = 1e-11
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Frame = +2
Query: 272 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVV 451
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 452 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTS 631
GWY TG + ++ + I+E R PN + + +D ++ + +AY + + G
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVST-LMGVPGRTMG 229
Query: 632 RTFEHVPSEIXXXXXXXXXXXHLLRD-IKDTTVGSLSQRITNQLLGLKG-LHSQLTEIRD 805
F + + +++ V LS + Q+ G + L+ +
Sbjct: 230 VMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDL-QQVGGASARIQDALSTVLQ 288
Query: 806 YLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLVVYXA 964
Y V G + ++ + L + N +P I D+F ND +V Y A
Sbjct: 289 YAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLA 341
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 70.5 bits (165), Expect = 1e-11
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Frame = +2
Query: 272 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVV 451
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 452 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTS 631
GWY TG + ++ + I+E R PN + + +D ++ + +AY + + G
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVST-LMGVPGRTMG 229
Query: 632 RTFEHVPSEIXXXXXXXXXXXHLLRD-IKDTTVGSLSQRITNQLLGLKG-LHSQLTEIRD 805
F + + +++ V LS + Q+ G + L+ +
Sbjct: 230 VMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDL-QQVGGASARIQDALSTVLQ 288
Query: 806 YLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLVVYXA 964
Y V G + ++ + L + N +P I D+F ND +V Y A
Sbjct: 289 YAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLA 341
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 70.5 bits (165), Expect = 1e-11
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Frame = +2
Query: 272 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVV 451
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 115 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 170
Query: 452 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTS 631
GWY TG + ++ + I+E R PN + + +D ++ + +AY + + G
Sbjct: 171 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVST-LMGVPGRTMG 229
Query: 632 RTFEHVPSEIXXXXXXXXXXXHLLRD-IKDTTVGSLSQRITNQLLGLKG-LHSQLTEIRD 805
F + + +++ V LS + Q+ G + L+ +
Sbjct: 230 VMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDL-QQVGGASARIQDALSTVLQ 288
Query: 806 YLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLVVYXA 964
Y V G + ++ + L + N +P I D+F ND +V Y A
Sbjct: 289 YAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLA 341
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 70.5 bits (165), Expect = 1e-11
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Frame = +2
Query: 272 RVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVV 451
RV+G LLG V +V+N F+VP +E + + +V D ++ +NMY + KKV+ E ++
Sbjct: 108 RVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELIL 163
Query: 452 GWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTS 631
GWY TG + ++ + I+E R PN + + +D ++ + +AY + + G
Sbjct: 164 GWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVST-LMGVPGRTMG 222
Query: 632 RTFEHVPSEIXXXXXXXXXXXHLLRD-IKDTTVGSLSQRITNQLLGLKG-LHSQLTEIRD 805
F + + +++ V LS + Q+ G + L+ +
Sbjct: 223 VMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDL-QQVGGASARIQDALSTVLQ 281
Query: 806 YLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNXYVKTNDQSLVVYXA 964
Y V G + ++ + L + N +P I D+F ND +V Y A
Sbjct: 282 YAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLA 334
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 65.7 bits (153), Expect = 3e-10
Identities = 36/119 (30%), Positives = 65/119 (54%)
Frame = +2
Query: 233 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 412
D + R +K RV+G LLG V +V+N F+V ++E D+ +D ++ +NMY
Sbjct: 94 DSYERRNK--GAARVIGTLLGTVNKHSV-EVTNCFSVSYNESDEV----VVDMEFAKNMY 146
Query: 413 GMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 589
+ KKV+ E ++GWY G + ++ + I+E R PN + + +D ++ + +AY
Sbjct: 147 ELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAY 205
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.061
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 38 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 96
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 97 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 140
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 37.9 bits (84), Expect = 0.080
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 254 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 433
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 434 AREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 37.9 bits (84), Expect = 0.080
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 251 SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKV 430
++ G V+G++LG + ++ + +SFA+P + + + ++Y+ K+V
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMI-IMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 127
Query: 431 NAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 128 GHLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 37.9 bits (84), Expect = 0.080
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 254 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 433
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 434 AREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 37.9 bits (84), Expect = 0.080
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 254 KIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 433
+ G V+G++LG + + V + FA+P + SV +D + M M K+
Sbjct: 46 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTGVSVEAVDPVFQAKMLDMLKQTG 103
Query: 434 AREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIID 550
E VVGWYH+ P L DI + +V V++D
Sbjct: 104 RPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,156,784
Number of Sequences: 237096
Number of extensions: 2740634
Number of successful extensions: 5847
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5842
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18770764430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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