Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F07
         (1261 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   2.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   8.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -3

Query: 677 TCRIFFVKHVFSYTCSFEAYPYTHFIISPVIFNC*LTLKYISKANILN 534
           T  + +  H FSY C  + +     I + V F   L L+   +  ILN
Sbjct: 140 TFHLIYEAHGFSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTILN 187


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -3

Query: 677 TCRIFFVKHVFSYTCSFEAYPYTHFIISPVIFNC*LTLKYISKANILN 534
           T  + +  H FSY C  + +     I + V F   L L+   +  ILN
Sbjct: 136 TFHLIYEAHGFSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTILN 183


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 892 CYYYYFFSG 866
           CYYYY F G
Sbjct: 114 CYYYYAFFG 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,143
Number of Sequences: 336
Number of extensions: 4909
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36993960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)