Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F07
         (1261 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ...    29   5.3  
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ...    29   5.3  

>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
            F14F4.3b protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 372  YFIQIAKELFVVVIYFFPCFKL*LNMQFRKGHISEN 479
            YF+  A  LFVV + F  CF+  +    R  HIS +
Sbjct: 936  YFLLFAIPLFVVFVVFVSCFRAGIRNLKRSEHISRS 971


>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
            F14F4.3a protein.
          Length = 1400

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 372  YFIQIAKELFVVVIYFFPCFKL*LNMQFRKGHISEN 479
            YF+  A  LFVV + F  CF+  +    R  HIS +
Sbjct: 909  YFLLFAIPLFVVFVVFVSCFRAGIRNLKRSEHISRS 944


>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
            protein F14F4.3b protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 372  YFIQIAKELFVVVIYFFPCFKL*LNMQFRKGHISEN 479
            YF+  A  LFVV + F  CF+  +    R  HIS +
Sbjct: 936  YFLLFAIPLFVVFVVFVSCFRAGIRNLKRSEHISRS 971


>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
            protein F14F4.3a protein.
          Length = 1400

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 372  YFIQIAKELFVVVIYFFPCFKL*LNMQFRKGHISEN 479
            YF+  A  LFVV + F  CF+  +    R  HIS +
Sbjct: 909  YFLLFAIPLFVVFVVFVSCFRAGIRNLKRSEHISRS 944


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,579,312
Number of Sequences: 27780
Number of extensions: 436087
Number of successful extensions: 959
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)