Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F06
         (1268 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    28   0.67 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.88 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   2.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   4.7  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 0.67
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 409 SSSFSPDVYLDCLLKCATLKQV 474
           SSS SP+  LDCL KC+  K V
Sbjct: 139 SSSSSPEPNLDCLSKCSPTKCV 160


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 0.88
 Identities = 20/89 (22%), Positives = 43/89 (48%)
 Frame = +1

Query: 451  KCATLKQVMDKEAEIVTQSQFLQSEMQTLVYENYNKFISATETVRKMRSDFKIMQEEMNK 630
            K A  KQ  D  +   T++  +Q  +     E  N+  ++   V+ +++    + ++++K
Sbjct: 858  KVAECKQAFDSSS---TKADAMQKNVDRYT-EQINEITNSK--VKVLQTKINGLGKQIDK 911

Query: 631  LSENINKITTFSSQISENLQGSGNNVRRL 717
            LS NI+K+T        N+Q S + +  +
Sbjct: 912  LSANISKLTVEIKTSERNVQKSKDKINSM 940


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 619  EMNKLSENINKITTFSSQISENL 687
            E NK++E  N+I+ FS+ I  NL
Sbjct: 1046 ETNKIAEAFNRISRFSNWIKMNL 1068


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 517 QSEMQTLVYENYNKFISATETVRKMRSDFKIMQEEMNKLSE 639
           + E   L+ E+  K    +E +R +    K ++EE  +LSE
Sbjct: 172 KEESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSE 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 906,315
Number of Sequences: 2352
Number of extensions: 15828
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 145513932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)