Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F06
         (1268 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118494-1|AAM49863.1|  740|Drosophila melanogaster LD05535p pro...   177   3e-44
AE013599-2751|AAF57649.3|  740|Drosophila melanogaster CG15087-P...   177   3e-44
AE014134-2068|AAF53099.1|  570|Drosophila melanogaster CG6488-PA...    55   2e-07

>AY118494-1|AAM49863.1|  740|Drosophila melanogaster LD05535p
           protein.
          Length = 740

 Score =  177 bits (430), Expect = 3e-44
 Identities = 87/179 (48%), Positives = 115/179 (64%)
 Frame = +1

Query: 385 KENPLDIDSSSFSPDVYLDCLLKCATLKQVMDKEAEIVTQSQFLQSEMQTLVYENYNKFI 564
           K NP D+DSSSF  + YL+ LLK  +LKQ+MD EA +V  +Q L S+MQTLVYENYNKFI
Sbjct: 5   KANPFDMDSSSFDAEKYLERLLKDCSLKQIMDTEAAVVKDTQTLHSDMQTLVYENYNKFI 64

Query: 565 SATETVRKMRSDFKIMQEEMNKLSENINKITTFSSQISENLQGSGNNVRRLCGTRXXXXX 744
           SAT+T+R+M+ DFK M+ ++N L   +  ITTFS QI+  LQG+ + + RL         
Sbjct: 65  SATDTIRRMKDDFKQMETDVNLLMTKMQSITTFSEQITGTLQGTRSQLCRLSEKHSLLKR 124

Query: 745 XXXXXXXPSQLNKAIAEGRYSDAVQDYSHAQRVLQKYGNQPSFQSIQTECSEIIFGTEE 921
                  P++L   I E  Y+ AVQDY HAQ+V  +YG QPSF  IQ +C  I+   +E
Sbjct: 125 LQFLSTLPAKLKSLIEEQNYAQAVQDYLHAQKVFAQYGRQPSFDGIQRDCDAIMADLKE 183


>AE013599-2751|AAF57649.3|  740|Drosophila melanogaster CG15087-PA
           protein.
          Length = 740

 Score =  177 bits (430), Expect = 3e-44
 Identities = 87/179 (48%), Positives = 115/179 (64%)
 Frame = +1

Query: 385 KENPLDIDSSSFSPDVYLDCLLKCATLKQVMDKEAEIVTQSQFLQSEMQTLVYENYNKFI 564
           K NP D+DSSSF  + YL+ LLK  +LKQ+MD EA +V  +Q L S+MQTLVYENYNKFI
Sbjct: 5   KANPFDMDSSSFDAEKYLERLLKDCSLKQIMDTEAAVVKDTQTLHSDMQTLVYENYNKFI 64

Query: 565 SATETVRKMRSDFKIMQEEMNKLSENINKITTFSSQISENLQGSGNNVRRLCGTRXXXXX 744
           SAT+T+R+M+ DFK M+ ++N L   +  ITTFS QI+  LQG+ + + RL         
Sbjct: 65  SATDTIRRMKDDFKQMETDVNLLMTKMQSITTFSEQITGTLQGTRSQLCRLSEKHSLLKR 124

Query: 745 XXXXXXXPSQLNKAIAEGRYSDAVQDYSHAQRVLQKYGNQPSFQSIQTECSEIIFGTEE 921
                  P++L   I E  Y+ AVQDY HAQ+V  +YG QPSF  IQ +C  I+   +E
Sbjct: 125 LQFLSTLPAKLKSLIEEQNYAQAVQDYLHAQKVFAQYGRQPSFDGIQRDCDAIMADLKE 183


>AE014134-2068|AAF53099.1|  570|Drosophila melanogaster CG6488-PA
           protein.
          Length = 570

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
 Frame = +1

Query: 427 DVYLDCLLKCATLKQVMDKEAEIVTQSQFLQSEMQTLVYENYNKFISATETVRKMRSDFK 606
           D YL  L  C  ++Q+  ++  +  +++ +  + Q L   NY  FI+  E  R + S+F 
Sbjct: 34  DNYLAKLGTCK-VEQLKKEQTRLAEEARTILEQTQDLAISNYRTFITTAENSRSIFSEFL 92

Query: 607 IMQEEMNKLSENINKITTFSSQISENLQGSG--NNVRRLCG-TRXXXXXXXXXXXXPSQL 777
             +++++ L   ++K+   S Q    LQ S   N  RRL   T             P  +
Sbjct: 93  RSEQQLDTL---VSKLPDLSVQCERFLQDSAELNEQRRLNSITLQKNAQLLEVLELPQLM 149

Query: 778 NKAIAEGRYSDAVQDYSHAQRVLQKYGNQPSFQSI 882
            + I EGRY +A++  ++A R+ Q  G+ P   SI
Sbjct: 150 ERCIREGRYEEALELAAYATRLGQHQGHIPVVTSI 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,343,488
Number of Sequences: 53049
Number of extensions: 651106
Number of successful extensions: 1507
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6824990175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)