Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F05
         (1264 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   4.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   8.4  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +1

Query: 313 AAKAAKWASSD----NDFHNPDRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNE 480
           AA  + W S+       ++  D ++A+  +  G +L       KN      + L++W NE
Sbjct: 49  AADMSAWTSAGLQPTTGYYPYDPALAAYGYGAGYDL---AARRKNATRESTATLKAWLNE 105

Query: 481 HE 486
           H+
Sbjct: 106 HK 107


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 639 CVQLWTCW 662
           C + WTCW
Sbjct: 112 CTRYWTCW 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,693
Number of Sequences: 336
Number of extensions: 5397
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37096721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)