Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_F04
(1271 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 7e-11
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 44 3e-04
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.069
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 36 0.091
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9) 34 0.28
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 33 0.49
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.64
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.85
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 32 0.85
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 30 3.4
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 4.5
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 7.9
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/144 (30%), Positives = 73/144 (50%)
Frame = +1
Query: 442 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 621
+L L SY YL A +F+ GF K F K S + E L+K +RGG++
Sbjct: 208 NLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQD 267
Query: 622 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 801
+ D E G + ++ ALD +K + + + +H+ K+ D A++T +I
Sbjct: 268 IKKPEKD-------EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFI 316
Query: 802 EEEFVSQQADTIRSLAGHTSDLKR 873
E F+++Q + I+ LAGH ++LKR
Sbjct: 317 EGNFLTEQVEAIKELAGHLTNLKR 340
Score = 51.2 bits (117), Expect = 2e-06
Identities = 31/131 (23%), Positives = 66/131 (50%)
Frame = +1
Query: 481 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYT 660
A++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD---- 54
Query: 661 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIR 840
G+ + A+ AL +K++ + +H+ N D ++ ++E F+ +Q D+I+
Sbjct: 55 -HWGNGLMAMRDALYLEKEINHALLDLHQVADTN----RDPQVQDFLESNFLGEQVDSIK 109
Query: 841 SLAGHTSDLKR 873
+LA + S L+R
Sbjct: 110 TLANYVSTLQR 120
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/144 (27%), Positives = 72/144 (50%)
Frame = +1
Query: 442 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 621
+L L SY Y+ A +F+ GF K F K S + E L K +RGG++
Sbjct: 140 NLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD 199
Query: 622 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 801
+K + ++ G A+ ALD +K + + + +H+ K+ D +++ ++
Sbjct: 200 ---IKRPERDDW----GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWL 248
Query: 802 EEEFVSQQADTIRSLAGHTSDLKR 873
E ++++Q + I+ LAGH ++LKR
Sbjct: 249 ESHYLTEQVEAIKELAGHLTNLKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 55.2 bits (127), Expect = 1e-07
Identities = 37/144 (25%), Positives = 73/144 (50%)
Frame = +1
Query: 442 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 621
+L L SY Y+ A +F+ GF K F + S + E L K +RGG++
Sbjct: 155 NLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVLQD 214
Query: 622 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 801
+K + ++ G ++ + ALD +K + + + +H+ K+ D +++ ++
Sbjct: 215 ---IKRPERDDWGC--GQDV--IQAALDLEKHVNQALHDLHKVAEKHGD----SQMQDWL 263
Query: 802 EEEFVSQQADTIRSLAGHTSDLKR 873
E ++++Q + I+ LAGH ++LKR
Sbjct: 264 ESHYLTEQVEAIKELAGHMTNLKR 287
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 44.8 bits (101), Expect = 1e-04
Identities = 37/144 (25%), Positives = 67/144 (46%)
Frame = +1
Query: 442 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 621
+L L SY Y A YF+ + GF K F+K + + E
Sbjct: 21 NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEERE-------------------- 60
Query: 622 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 801
H K ++ E G + A+ ALD +K + + + + + KN D A+++ +I
Sbjct: 61 HAEKKPERD-----EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDFI 111
Query: 802 EEEFVSQQADTIRSLAGHTSDLKR 873
E+ F+++Q ++IR L+G+ + LK+
Sbjct: 112 EDHFLTEQVESIRELSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/76 (28%), Positives = 45/76 (59%)
Frame = +1
Query: 670 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 849
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F+++Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 850 GHTSDLKRFITENNGK 897
+ S L+R E G+
Sbjct: 64 NYVSTLRRLGGEGLGE 79
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 35.9 bits (79), Expect = 0.069
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 250 IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 411
++S+MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 46 MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 35.5 bits (78), Expect = 0.091
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = +2
Query: 704 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 883
++++SL +S SLK + ++ SL TSR+ K R + + +P+TSS S P
Sbjct: 105 SQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTD--RKKSRNTSPKRSPKTSSKSSP 162
Query: 884 RTTGKTCL 907
+T+ KT L
Sbjct: 163 KTSPKTSL 170
Score = 34.7 bits (76), Expect = 0.16
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +2
Query: 704 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 883
+R++SL R +S SLKT+ + +S NTS + S K + + +P+TS +
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRS--PKTSSKSSPKTSPKTSLKTSS 174
Query: 884 RTTGKTCLS 910
+T+ KT L+
Sbjct: 175 KTSPKTSLN 183
>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
Length = 117
Score = 33.9 bits (74), Expect = 0.28
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 270 VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 392
V SH LSG GC G+GR + E++ R +A LQ +LR
Sbjct: 56 VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 33.1 bits (72), Expect = 0.49
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 262 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 411
MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.64
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 463 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 561
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 32.3 bits (70), Expect = 0.85
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Frame = +1
Query: 745 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRFITENNG 894
+EVT N+ L D +TQ E EE+V + IR + T +KR+IT++NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 32.3 bits (70), Expect = 0.85
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 704 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 883
+RR+SL R +S S KT ++ S TS + P +S+ +P+TS S P
Sbjct: 89 SRRTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEIGPRTSPK--TSSKTSPKTSPKSSP 146
Query: 884 RTTGKT 901
+T+ KT
Sbjct: 147 KTSPKT 152
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 710 RSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPR--TSSGS*P 883
++SL +S SLKT+ ++M SL TSRR S + P + + + R TS + P
Sbjct: 154 KTSLKTSLKASLKTSLKTSLKTSMKTSLKTSRRTSLKTCPKTSLETSMKTRLNTSQKTSP 213
Query: 884 RTT 892
T+
Sbjct: 214 ETS 216
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 704 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 883
+R++S S S KT+ + +SL TS + S P R +P+TSS + P
Sbjct: 333 SRKTSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISP------RTSPKTSSKTSP 386
Query: 884 RTTGKTCLS 910
+T+ KT L+
Sbjct: 387 KTSLKTSLN 395
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 664 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 843
E+G ++ L+KAL +++LA +I + E T NS ++ E T E +S+ +
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDTVRELETEISKLEEEKAK 515
Query: 844 LAGHTSDLKRFI-TENNGK 897
LA + K + ++++GK
Sbjct: 516 LATALATAKTAVHSDSDGK 534
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 792 SDLGIVEEVAVFSDFPVDEENPLGKLLLRVQ 700
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 695 KPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS 814
KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 1005 KPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,744,469
Number of Sequences: 59808
Number of extensions: 614694
Number of successful extensions: 1595
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3999381315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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