Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_F01
         (1288 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_04_0007 + 7439378-7439677,7439873-7440308,7440483-7440593,744...    29   6.0  

>10_04_0007 +
           7439378-7439677,7439873-7440308,7440483-7440593,
           7440633-7440762,7440798-7441512
          Length = 563

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
 Frame = +2

Query: 296 IDKRASQPSG------QHSTSEKCGQAGEGGTSCPRASLLAPMDMNSRAY 427
           +D    QP G       H T E CG  G  G  CP+    A    N+  Y
Sbjct: 175 LDDHEKQPQGTVKALDSHVTCEVCGNTGHSGNDCPKTREEAMYMGNNNGY 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,381,681
Number of Sequences: 37544
Number of extensions: 524811
Number of successful extensions: 1798
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4004040288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)