Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E22
         (1230 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary ...    32   3.7  
X60382-1|CAA42933.1|  680|Homo sapiens collagen subunit  (alpha-...    32   4.9  
S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   31   6.5  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   31   6.5  

>K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary
            proline-rich protein 1 gene, segment 1. ).
          Length = 173

 Score = 32.3 bits (70), Expect = 3.7
 Identities = 24/87 (27%), Positives = 28/87 (32%)
 Frame = +3

Query: 933  PXXXRXP*ARPPDEXXKXTPSXXGXTRRXXXSRXXPGXPXGPPVRPXXXGXGXLXPXXXG 1112
            P     P   PP    +  P   G  +R    R  PG P GPP +      G   P    
Sbjct: 45   PQGGNKPQGPPPPGKPQGPPPQGG--KRSRSPRSPPGKPQGPPPQGGNQPQGPPPPPG-- 100

Query: 1113 XPXPXXXXXRGXXXPXGGXXPXXPXGP 1193
               P     +G   P G   P  P GP
Sbjct: 101  --KPQGPPPQGGNKPQGPPPPGKPQGP 125


>X60382-1|CAA42933.1|  680|Homo sapiens collagen subunit  (alpha-1
            (X)) 3 protein.
          Length = 680

 Score = 31.9 bits (69), Expect = 4.9
 Identities = 18/56 (32%), Positives = 19/56 (33%)
 Frame = +3

Query: 1047 PXGPPVRPXXXGXGXLXPXXXGXPXPXXXXXRGXXXPXGGXXPXXPXGPXXXXXXP 1214
            P GPP  P   G     P   G P P     +G   P G   P  P GP      P
Sbjct: 453  PIGPPGIPGFPGSKG-DPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGPSGEPGLP 507


>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 23/77 (29%), Positives = 26/77 (33%)
 Frame = +3

Query: 963  PPDEXXKXTPSXXGXTRRXXXSRXXPGXPXGPPVRPXXXGXGXLXPXXXGXPXPXXXXXR 1142
            PP    +  P   G   R   SR  PG P GPP +      G   P       P     +
Sbjct: 244  PPPGKPQGPPPQGGSKSRS--SRSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGPPPQ 297

Query: 1143 GXXXPXGGXXPXXPXGP 1193
            G   P G   P  P GP
Sbjct: 298  GGNKPQGPPPPGKPQGP 314


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 23/77 (29%), Positives = 26/77 (33%)
 Frame = +3

Query: 963  PPDEXXKXTPSXXGXTRRXXXSRXXPGXPXGPPVRPXXXGXGXLXPXXXGXPXPXXXXXR 1142
            PP    +  P   G   R   SR  PG P GPP +      G   P       P     +
Sbjct: 113  PPPGKPQGPPPQGGSKSRS--SRSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGPPPQ 166

Query: 1143 GXXXPXGGXXPXXPXGP 1193
            G   P G   P  P GP
Sbjct: 167  GGNKPQGPPPPGKPQGP 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,481,888
Number of Sequences: 237096
Number of extensions: 2127483
Number of successful extensions: 2799
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17449654910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)