Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E18
(1313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.11
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.78
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.78
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.2
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 30 4.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.3
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 7.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 9.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 9.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 9.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 995 GGXXXFXXXXXPXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXGXXGG 837
GG P GG PP GGPPP P G PP P G G
Sbjct: 733 GGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 962 PXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXG 849
P GG PP GGPPP P PP P G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGGXXXXPP 209
PPP GG P PPP GG PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPP 271
PP GG PP GG PP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGG 227
PPP GG GGP PPP G
Sbjct: 772 PPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPPXXXG 283
PP GG PP G PP PPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -1
Query: 284 PPXXXGG-----GXGGPXPPPXXGXXXXPPPXXXFXFXGG 180
PP GG G P PPP G PPP F GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 284 PPXXXGGGXGGPXPPPXXGXXXXPPP 207
PP GG P PPP G PPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 929 PPFXGGPPPXXKXPXGXXKXXPPXP 855
PP G PPP P G K PP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 180 PPXKXKXXXXGGXXXXPPXGGGXGPPXXPPXXXG 281
PP GG PP GG PP PP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 995 GGXXXFXXXXXPXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXGXXGG 837
GG P GG PP GGPPP P G PP P G G
Sbjct: 733 GGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 962 PXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXG 849
P GG PP GGPPP P PP P G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGGXXXXPP 209
PPP GG P PPP GG PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPP 271
PP GG PP GG PP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGG 227
PPP GG GGP PPP G
Sbjct: 772 PPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPPXXXG 283
PP GG PP G PP PPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -1
Query: 284 PPXXXGG-----GXGGPXPPPXXGXXXXPPPXXXFXFXGG 180
PP GG G P PPP G PPP F GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 284 PPXXXGGGXGGPXPPPXXGXXXXPPP 207
PP GG P PPP G PPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 929 PPFXGGPPPXXKXPXGXXKXXPPXP 855
PP G PPP P G K PP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 180 PPXKXKXXXXGGXXXXPPXGGGXGPPXXPPXXXG 281
PP GG PP GG PP PP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 995 GGXXXFXXXXXPXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXGXXGG 837
GG P GG PP GGPPP P G PP P G G
Sbjct: 316 GGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 962 PXXFXGGFFXXPPFXGGPPPXXKXPXGXXKXXPPXPXG 849
P GG PP GGPPP P PP P G
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGGXXXXPP 209
PPP GG P PPP GG PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPP 271
PP GG PP GG PP PPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 286 PPPXXWGGXXGGPXPPPXGG 227
PPP GG GGP PPP G
Sbjct: 355 PPPPPPGGFKGGPPPPPPPG 374
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 182 PPXXKXXXXGGGGXXPPXXGGXXAPPXPPPXXXG 283
PP GG PP G PP PPP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = -1
Query: 284 PPXXXGG-----GXGGPXPPPXXGXXXXPPPXXXFXFXGG 180
PP GG G P PPP G PPP F GG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 284 PPXXXGGGXGGPXPPPXXGXXXXPPP 207
PP GG P PPP G PPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 929 PPFXGGPPPXXKXPXGXXKXXPPXP 855
PP G PPP P G K PP P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 180 PPXKXKXXXXGGXXXXPPXGGGXGPPXXPPXXXG 281
PP GG PP GG PP PP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.78
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 208 GGGXXXXPXXGGGXGPPXPPPXXXGG 285
GGG GGG PP PPP GG
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 32.3 bits (70), Expect = 0.78
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 208 GGGXXXXPXXGGGXGPPXPPPXXXGG 285
GGG GGG PP PPP GG
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPPACGGG 121
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 224 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 283
Query: 922 KG 927
G
Sbjct: 284 GG 285
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 922 KG 927
G
Sbjct: 374 GG 375
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 344 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 403
Query: 922 KG 927
G
Sbjct: 404 GG 405
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 463
Query: 922 KG 927
G
Sbjct: 464 GG 465
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 419 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 478
Query: 922 KG 927
G
Sbjct: 479 GG 480
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 493
Query: 922 KG 927
G
Sbjct: 494 GG 495
Score = 32.3 bits (70), Expect = 0.78
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 449 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 508
Query: 922 KG 927
G
Sbjct: 509 GG 510
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 298
Query: 922 KG 927
G
Sbjct: 299 GG 300
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 269 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPS 328
Query: 922 KG 927
G
Sbjct: 329 GG 330
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 284 GGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 343
Query: 922 KG 927
G
Sbjct: 344 GG 345
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 299 GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 358
Query: 922 KG 927
G
Sbjct: 359 GG 360
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 329 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 388
Query: 922 KG 927
G
Sbjct: 389 GG 390
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 359 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 418
Query: 922 KG 927
G
Sbjct: 419 GG 420
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 433
Query: 922 KG 927
G
Sbjct: 434 GG 435
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G PP
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 448
Query: 922 KG 927
G
Sbjct: 449 GG 450
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPP 918
G PP G P P GP PP G P G F G PP
Sbjct: 464 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP P P GP PP G P G F G PP
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 922 KG 927
G
Sbjct: 254 GG 255
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G PP G P P GP PP G P G F G P
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 922 KG 927
G
Sbjct: 314 GG 315
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 742 GXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGGGPPX 921
G P G P P GP PP G P G F G PP
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 268
Query: 922 KG 927
G
Sbjct: 269 GG 270
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.4
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 2/89 (2%)
Frame = +1
Query: 736 GGGXPPXXKKXXGXXPKKTPRGPXXXKXXXKKKNPPXXPXGXGGXXXKXPXGXFXXGG-G 912
GG PP P P P P G GG P G G G
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 913 PPXKG-GXXKKPPXKXXGXXXXKXFXXPP 996
PP G G PP G PP
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 679 PPPXPFFFFXXXLXPFLXNFFXXXPPLFXXXXXPPXXGGKXXXP-PPXP 536
PPP P F P + PP+F PP G P PP P
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 695 PPPXKKKKKXXPXGGGGXPXXKKKXXGXPPKKPP--GGXXXXKXXKKKKTPPXXPXGXG 865
PPP P G GG P G P PP GG PP P G G
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 283 PPXXWGGXXGGPXPPPXGGXXXXPP 209
PP G GGP PPP G PP
Sbjct: 201 PPQGMPGYPGGPPPPPHGYEGYPPP 225
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 227 PPXXGGXXAPPXPPPXXXGG 286
PP GG APP PPP G
Sbjct: 45 PPCGGGYEAPPPPPPPSYAG 64
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 929 PPFXGGPPPXXKXPXGXXKXXPPXPXGXXG 840
PP GPPP P G PP P G G
Sbjct: 29 PPQCCGPPPACGNPCGGGFGPPPPPFGPVG 58
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 917 GGPPPXXKXPXGXXKXXPPXPXGXXGGFFFFXXXFXKXGPRGVFLGXXPXFFFXXGGXPP 738
G PPP G PP P GG G RG G P F GG P
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPP---RGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGP 810
Query: 737 P 735
P
Sbjct: 811 P 811
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 285 PPXXXGGGXGGAXXPPXXGGXXPPPPXXXFXFXGG 181
PP GGG GG GG PPP GG
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 285 PPXXXGGGXGGAXXPPXXGGXXPPPPXXXFXFXGG 181
PP GGG GG GG PPP GG
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 208 GGGXXXXPXXGGGXGPPXPPPXXXGG 285
GGG G G PP PPP GG
Sbjct: 197 GGGGSGGSGGGSGRFPPPPPPYGGGG 222
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 208 GGGXXXXPXXGGGXGPPXPP 267
GGG P GGG GP PP
Sbjct: 624 GGGPPRGPGGGGGGGPTGPP 643
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 208 GGGXXXXPXXGGGXGPPXPP 267
GGG P GGG GP PP
Sbjct: 624 GGGPPRGPGGGGGGGPTGPP 643
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 679 PPPXPFFFFXXXLXPFLXNFFXXXPPLFXXXXXPPXXGGKXXXPP 545
PPP P F PF F PP F PP GG P
Sbjct: 337 PPPHPMMFRGGPYPPF----FPPPPPHFMRPSSPPTDGGPIITGP 377
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 679 PPPXPFFFFXXXLXPFLXNFFXXXPPLFXXXXXPPXXGGKXXXPP 545
PPP P F PF F PP F PP GG P
Sbjct: 337 PPPHPMMFRGGPYPPF----FPPPPPHFMRPSSPPTDGGPIITGP 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.151 0.501
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,154,878
Number of Sequences: 27780
Number of extensions: 373707
Number of successful extensions: 1819
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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