Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E17
         (1276 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083...    31   1.9  
04_01_0175 - 1972361-1972429,1973185-1973334,1974956-1975105,197...    29   5.9  
02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420     29   7.8  

>04_04_0464 -
           25405629-25405665,25406644-25406710,25408112-25408373,
           25408989-25409198,25409818-25410006,25410087-25410548,
           25410889-25410936,25411972-25412301
          Length = 534

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +2

Query: 281 IVNRLIXENKRNLCDLAYKLWDYMDEXQEIVKEYFPVIFRQIFSEN---SVKIINKRDNL 451
           +VN+++     +L  +A    DY      +V +Y  V  R+ F +N    V I+  +D +
Sbjct: 111 VVNKILFGTAPDLRSMAASEMDYRPSRMAVVAKYAEVFIREFFDQNPLSHVGIVTMKDGI 170

Query: 452 AIKLGDALDSDNDRV 496
           + +L +   S   ++
Sbjct: 171 SHRLTEIGGSPESQI 185


>04_01_0175 -
           1972361-1972429,1973185-1973334,1974956-1975105,
           1975370-1975417,1975717-1975793,1975897-1975999,
           1977103-1977233,1978793-1978970,1980656-1980676,
           1981233-1981290,1981381-1981444,1982261-1982431,
           1982526-1982637,1982779-1983021,1983783-1983964,
           1984785-1984920
          Length = 630

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 789 ATETDARTQAPAASKVNPSSTPGLSRSSTKP 881
           AT T + + A AAS  +P+   GL RSST P
Sbjct: 27  ATATASASAAAAASSSSPADDRGLPRSSTMP 57


>02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420
          Length = 256

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 840 PSSTPGLSRSSTKPNCTYSSINMQFPMTIP 929
           PS  PGLSR++TK    +SSI   +  T P
Sbjct: 97  PSRLPGLSRAATKSARRHSSITRFYTRTAP 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,669,872
Number of Sequences: 37544
Number of extensions: 475189
Number of successful extensions: 1268
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)