Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E17
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 33 0.57
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 33 0.57
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 33 0.57
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 33 0.57
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 33 0.57
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 33 0.57
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 33 0.57
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 32 0.76
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 32 0.76
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 32 1.00
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 29 5.3
U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical pr... 29 5.3
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 5.3
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 5.3
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 5.3
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 5.3
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 763 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 822
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 823 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 855
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 1292 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 1351
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 1352 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 1384
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 973 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 1032
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 1033 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 1065
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 763 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 822
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 823 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 855
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 1292 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 1351
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 1352 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 1384
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 973 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 1032
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 1033 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 1065
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 EYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYG-DANDKTSDNVGWKLIP 553
E+ I + +FS+ V + R + + +++D D NDK ++ V W
Sbjct: 182 EWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESDLATLETDVNDKDAEVVWWHDGK 241
Query: 554 LWDDNRVYFKIFSVHRNQYLKL-GTRIDVDNDHGVY 658
D + V FK+ S +R + L + G RI+ DHG Y
Sbjct: 242 RIDIDGVKFKVESSNRKRRLIINGARIE---DHGEY 274
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 786 TATETDARTQAPAASKVN-PSSTPGLSRSSTKPNCTYSSINMQFPMTIPG 932
+ +E ++AP AS + PSSTP S SS +PN + +S++ + T PG
Sbjct: 564 STSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTE---TSPG 610
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 786 TATETDARTQAPAASKVN-PSSTPGLSRSSTKPNCTYSSINMQFPMTIPG 932
+ +E ++AP AS + PSSTP S SS +PN + +S++ + T PG
Sbjct: 564 STSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTE---TSPG 610
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 786 TATETDARTQAPAASKVN-PSSTPGLSRSSTKPNCTYSSINMQFPMTIPG 932
+ +E ++AP AS + PSSTP S SS +PN + +S++ + T PG
Sbjct: 564 STSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTE---TSPG 610
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 786 TATETDARTQAPAASKVN-PSSTPGLSRSSTKPNCTYSSINMQFPMTIPG 932
+ +E ++AP AS + PSSTP S SS +PN + +S++ + T PG
Sbjct: 564 STSEPSMSSEAPGASSSDFPSSTPDSSVSSEEPNASSNSVSTE---TSPG 610
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 31.9 bits (69), Expect = 1.00
Identities = 24/84 (28%), Positives = 33/84 (39%)
Frame = +2
Query: 596 HRNQYLKLGTRIDVDNDHGVYGDDRADTHRHQWYLKPVELENQVLFYIYNRQYDQALKLG 775
HR L T D H G D++ H H WYL + + YI + K+
Sbjct: 1110 HRGSVSSLITDKPRDRVHDEKGVDQSGRHFHSWYLGTISINQVTPSYI---ELKNICKI- 1165
Query: 776 RNVDSDGDRRAYSSSSSVEGQPEL 847
R VD G R S + V G ++
Sbjct: 1166 RRVDVGGFRIEQSVNGQVLGSAQI 1189
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 638 DNDHGVYGDDRADTHRHQWYLKPVELENQVLFYIYNRQYDQALKLGRNVDSDGDRRAYSS 817
D H G D++ H H WYL + + YI + K+ R VD G R S
Sbjct: 512 DRVHDEKGVDQSGRHFHSWYLGTISINQVTPSYI---ELKNICKI-RRVDVGGFRIEQSV 567
Query: 818 SSSVEGQPEL 847
+ V G ++
Sbjct: 568 NGQVLGSAQI 577
>U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical
protein T25F10.3 protein.
Length = 429
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 777 EMLTATETDARTQAPAASKVNPSSTPGLSRSSTKP 881
EM T TDA Q+P A+ + S P + SS+ P
Sbjct: 375 EMQATTPTDASLQSPPAAHPDHSDVPDIPSSSSPP 409
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 813 QAPAASKVNPSSTPGLSRSSTKPNCTYSS 899
+APA++ SSTPG SR++ +P C SS
Sbjct: 528 KAPASTSTPASSTPGTSRAA-RPECLRSS 555
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 813 QAPAASKVNPSSTPGLSRSSTKPNCTYSS 899
+APA++ SSTPG SR++ +P C SS
Sbjct: 579 KAPASTSTPASSTPGTSRAA-RPECLRSS 606
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 813 QAPAASKVNPSSTPGLSRSSTKPNCTYSS 899
+APA++ SSTPG SR++ +P C SS
Sbjct: 579 KAPASTSTPASSTPGTSRAA-RPECLRSS 606
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 179 QSRWVHELGSWRPRRSKAXREQRP-SKAREPPRXAD*LPRXXNNARXREDERXP 21
+SRW + PRRS R+ R S++R PPR R + R RE+ P
Sbjct: 554 RSRWENTSPIRSPRRSPLRRDNRDRSRSRSPPRRR----RRSRSPRRREEHTDP 603
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,406,163
Number of Sequences: 27780
Number of extensions: 383315
Number of successful extensions: 1182
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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