Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E15
         (1256 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          26   0.60 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   2.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   5.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 80  TESQMSTPVNTISRESLKVFITNN--VFKKPLDFNSDCDMDTESPLRKPNL 226
           T    +T   TIS++ +KVF+ N   + +  +D N D D +   P +K ++
Sbjct: 387 TTEPSTTTSTTISQKHIKVFVVNKDILHEHNVDDNEDHDENMIIPPKKSDM 437


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 600 GRSQHALRPLSNRLRSELRLFLAIDDYR 683
           G  QH L P  N+    + LF+ + DY+
Sbjct: 582 GWPQHMLIPKGNKEGFAMELFVMVSDYK 609


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 224 LQPITRRLFHSPITN 268
           L P+T  L++SP+T+
Sbjct: 259 LSPVTNNLYYSPLTS 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,101
Number of Sequences: 438
Number of extensions: 6488
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42982554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)