Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E13
(1295 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 390 e-108
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 390 e-108
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 390 e-108
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 390 e-108
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 390 e-108
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 390 e-108
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 390 e-108
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 389 e-107
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 388 e-107
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 256 1e-67
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 2e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 200 1e-50
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 4e-43
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 158 5e-38
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 36 0.43
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 390 bits (961), Expect = e-108
Identities = 188/221 (85%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 389 bits (957), Expect = e-107
Identities = 187/221 (84%), Positives = 200/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 388 bits (956), Expect = e-107
Identities = 187/221 (84%), Positives = 199/221 (90%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 448
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLR 124
Query: 449 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 628
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 629 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 256 bits (627), Expect = 1e-67
Identities = 121/140 (86%), Positives = 127/140 (90%)
Frame = +2
Query: 332 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 511
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 512 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 691
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 692 DHILVTEPKDEPVPLEPTSE 751
DH+ + EPKDE +P P SE
Sbjct: 121 DHVSIVEPKDEILPTTPISE 140
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 2e-58
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +2
Query: 260 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 439
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 440 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 619
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 620 LGIKVKI 640
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 200 bits (487), Expect = 1e-50
Identities = 98/113 (86%), Positives = 105/113 (92%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 427
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (425), Expect = 4e-43
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = +2
Query: 455 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 634
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 635 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 751
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 158 bits (383), Expect = 5e-38
Identities = 77/91 (84%), Positives = 83/91 (91%)
Frame = +2
Query: 89 LSKXRKFVGXGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEXIIMATRTQSVLGEKGR 268
+SK RKFV G+FKAELNEFLTRELAEDGYSGVEVRVTP R+E II+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 269 RIRELTSVVQKRFNIPEQSVELYAEKVATRG 361
RIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.5 bits (78), Expect = 0.43
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 598 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRACAPR 738
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,137,843
Number of Sequences: 237096
Number of extensions: 2647058
Number of successful extensions: 14112
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14108
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18660671970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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