Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E12
(1272 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117486-1|AAI17487.1| 138|Homo sapiens nanos homolog 2 (Drosop... 90 1e-17
BC117484-1|AAI17485.1| 138|Homo sapiens nanos homolog 2 (Drosop... 90 1e-17
BC042883-1|AAH42883.1| 138|Homo sapiens nanos homolog 2 (Drosop... 90 1e-17
BC101210-1|AAI01211.1| 192|Homo sapiens NANOS3 protein protein. 88 6e-17
BC101209-1|AAI01210.1| 192|Homo sapiens NANOS3 protein protein. 88 6e-17
AL157788-3|CAI14719.1| 84|Homo sapiens nanos homolog 1 (Drosop... 83 2e-15
AL157788-2|CAI14718.1| 292|Homo sapiens nanos homolog 1 (Drosop... 83 2e-15
AF458985-1|AAQ04765.1| 292|Homo sapiens EC_Rep1a protein. 83 2e-15
AF275269-1|AAL36982.2| 292|Homo sapiens NANOS1 protein. 83 2e-15
>BC117486-1|AAI17487.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 90.2 bits (214), Expect = 1e-17
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPEN-SDAS 846
C FCK+NGE+ YSSH LK G V+CP+LR + CP CGATGD+AHT+KYCP N S
Sbjct: 63 CNFCKHNGESRHVYSSHQLKTPDGVVVCPILRHYVCPVCGATGDQAHTLKYCPLNGGQQS 122
Query: 847 LFVTGSDRSGSLSARRRV 900
L+ RSG SA RRV
Sbjct: 123 LY----RRSGRNSAGRRV 136
>BC117484-1|AAI17485.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 90.2 bits (214), Expect = 1e-17
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPEN-SDAS 846
C FCK+NGE+ YSSH LK G V+CP+LR + CP CGATGD+AHT+KYCP N S
Sbjct: 63 CNFCKHNGESRHVYSSHQLKTPDGVVVCPILRHYVCPVCGATGDQAHTLKYCPLNGGQQS 122
Query: 847 LFVTGSDRSGSLSARRRV 900
L+ RSG SA RRV
Sbjct: 123 LY----RRSGRNSAGRRV 136
>BC042883-1|AAH42883.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 90.2 bits (214), Expect = 1e-17
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPEN-SDAS 846
C FCK+NGE+ YSSH LK G V+CP+LR + CP CGATGD+AHT+KYCP N S
Sbjct: 63 CNFCKHNGESRHVYSSHQLKTPDGVVVCPILRHYVCPVCGATGDQAHTLKYCPLNGGQQS 122
Query: 847 LFVTGSDRSGSLSARRRV 900
L+ RSG SA RRV
Sbjct: 123 LY----RRSGRNSAGRRV 136
>BC101210-1|AAI01211.1| 192|Homo sapiens NANOS3 protein protein.
Length = 192
Score = 88.2 bits (209), Expect = 6e-17
Identities = 41/94 (43%), Positives = 51/94 (54%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPENSDASL 849
C+FCK+NGE+ Y SH LKD GRVLCP+LR + CP+CGAT +RAHT ++CP
Sbjct: 77 CSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRERAHTRRFCPLTGQGYT 136
Query: 850 FVTGSDRSGSLSARRRVPPSASLVMGGTNRTGXG 951
V S + P A G R G G
Sbjct: 137 SVYSHTTRNSAGKKLVRPDKAKTQDTGHRRGGGG 170
>BC101209-1|AAI01210.1| 192|Homo sapiens NANOS3 protein protein.
Length = 192
Score = 88.2 bits (209), Expect = 6e-17
Identities = 41/94 (43%), Positives = 51/94 (54%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPENSDASL 849
C+FCK+NGE+ Y SH LKD GRVLCP+LR + CP+CGAT +RAHT ++CP
Sbjct: 77 CSFCKHNGESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATRERAHTRRFCPLTGQGYT 136
Query: 850 FVTGSDRSGSLSARRRVPPSASLVMGGTNRTGXG 951
V S + P A G R G G
Sbjct: 137 SVYSHTTRNSAGKKLVRPDKAKTQDTGHRRGGGG 170
>AL157788-3|CAI14719.1| 84|Homo sapiens nanos homolog 1
(Drosophila) protein.
Length = 84
Score = 83.4 bits (197), Expect = 2e-15
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCP 828
C FC+NN E Y++H LK GRVLCPVLR + CP CGA+GD AHTIKYCP
Sbjct: 6 CVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 58
>AL157788-2|CAI14718.1| 292|Homo sapiens nanos homolog 1
(Drosophila) protein.
Length = 292
Score = 83.4 bits (197), Expect = 2e-15
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCP 828
C FC+NN E Y++H LK GRVLCPVLR + CP CGA+GD AHTIKYCP
Sbjct: 214 CVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
>AF458985-1|AAQ04765.1| 292|Homo sapiens EC_Rep1a protein.
Length = 292
Score = 83.4 bits (197), Expect = 2e-15
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCP 828
C FC+NN E Y++H LK GRVLCPVLR + CP CGA+GD AHTIKYCP
Sbjct: 214 CVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
>AF275269-1|AAL36982.2| 292|Homo sapiens NANOS1 protein.
Length = 292
Score = 83.4 bits (197), Expect = 2e-15
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCP 828
C FC+NN E Y++H LK GRVLCPVLR + CP CGA+GD AHTIKYCP
Sbjct: 214 CVFCRNNKEAMALYTTHILKGPDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,169,280
Number of Sequences: 237096
Number of extensions: 3295117
Number of successful extensions: 10866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10863
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18220302130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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