Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E12
(1272 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M72421-1|AAA28715.1| 401|Drosophila melanogaster nanos protein. 81 4e-15
AE014297-2634|AAF55641.1| 401|Drosophila melanogaster CG5637-PA... 81 4e-15
BT001284-1|AAN71040.1| 588|Drosophila melanogaster AT08275p pro... 33 1.1
AE013599-2481|AAF57854.3| 584|Drosophila melanogaster CG30103-P... 33 1.1
AY070513-1|AAL47984.1| 551|Drosophila melanogaster GH19382p pro... 30 7.8
AY061187-1|AAL28735.1| 423|Drosophila melanogaster LD15072p pro... 30 7.8
AE013599-2304|AAO41370.1| 577|Drosophila melanogaster CG4945-PC... 30 7.8
AE013599-2303|AAO41369.1| 577|Drosophila melanogaster CG4945-PB... 30 7.8
AE013599-2302|AAF57985.2| 551|Drosophila melanogaster CG4945-PA... 30 7.8
AE013599-1720|AAF58372.1| 423|Drosophila melanogaster CG5970-PA... 30 7.8
>M72421-1|AAA28715.1| 401|Drosophila melanogaster nanos protein.
Length = 401
Score = 80.6 bits (190), Expect = 4e-15
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 652 RALPNECAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPE 831
+ + C FC+NN E E +SH+++D RVLCP LR + CP CGA+GD AHTIKYCP+
Sbjct: 313 KEISRHCVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCPK 372
>AE014297-2634|AAF55641.1| 401|Drosophila melanogaster CG5637-PA
protein.
Length = 401
Score = 80.6 bits (190), Expect = 4e-15
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 652 RALPNECAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPE 831
+ + C FC+NN E E +SH+++D RVLCP LR + CP CGA+GD AHTIKYCP+
Sbjct: 313 KEISRHCVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCPK 372
>BT001284-1|AAN71040.1| 588|Drosophila melanogaster AT08275p
protein.
Length = 588
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 509 RKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK*L*FGSISSNSGSVPLSRMFSRMS 330
R V+ + FLAPD + L H LDD TD+ + F +SSN + ++ +
Sbjct: 104 RGKMVARMLNFLAPDAMALGVHELDDGTDALAEFLNTITFPMVSSNINLINEPKLAENAN 163
Query: 329 SI-SVLFGAGSAALG 288
+ S++ G+ +G
Sbjct: 164 LVTSLVITKGNRKIG 178
>AE013599-2481|AAF57854.3| 584|Drosophila melanogaster CG30103-PA
protein.
Length = 584
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 509 RKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK*L*FGSISSNSGSVPLSRMFSRMS 330
R V+ + FLAPD + L H LDD TD+ + F +SSN + ++ +
Sbjct: 100 RGKMVARMLNFLAPDAMALGVHELDDGTDALAEFLNTITFPMVSSNINLINEPKLAENAN 159
Query: 329 SI-SVLFGAGSAALG 288
+ S++ G+ +G
Sbjct: 160 LVTSLVITKGNRKIG 174
>AY070513-1|AAL47984.1| 551|Drosophila melanogaster GH19382p
protein.
Length = 551
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 430 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 296
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AY061187-1|AAL28735.1| 423|Drosophila melanogaster LD15072p
protein.
Length = 423
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 YNHQQPRGIILSYNAIVSKRRK*SSQ-LTSSAGTKSRG 302
+ H+ P G + YNA+VSK + + Q L S+ TKS G
Sbjct: 183 FGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG 220
>AE013599-2304|AAO41370.1| 577|Drosophila melanogaster CG4945-PC,
isoform C protein.
Length = 577
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 430 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 296
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-2303|AAO41369.1| 577|Drosophila melanogaster CG4945-PB,
isoform B protein.
Length = 577
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 430 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 296
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-2302|AAF57985.2| 551|Drosophila melanogaster CG4945-PA,
isoform A protein.
Length = 551
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 430 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 296
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-1720|AAF58372.1| 423|Drosophila melanogaster CG5970-PA
protein.
Length = 423
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 YNHQQPRGIILSYNAIVSKRRK*SSQ-LTSSAGTKSRG 302
+ H+ P G + YNA+VSK + + Q L S+ TKS G
Sbjct: 183 FGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG 220
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,905,997
Number of Sequences: 53049
Number of extensions: 1057120
Number of successful extensions: 2947
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2946
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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