Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E12
(1272 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 37 0.027
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 37 0.027
U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related ... 32 1.00
Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical p... 30 3.0
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 29 5.3
U41996-5|AAA83474.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.3
U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z81142-9|CAB03501.2| 370|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 29 9.3
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 29 9.3
L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical pr... 29 9.3
>Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical
protein R03D7.7 protein.
Length = 311
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +1
Query: 709 YSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKY 822
+S H K RGRV+CP LR+ C CGATGD AHT K+
Sbjct: 267 WSDHCSKK-RGRVVCPKLRSMVCGICGATGDNAHTTKH 303
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 37.1 bits (82), Expect = 0.027
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPENSD 840
C C++ E SSH ++ G + C ++ +C C ATG++ H CP+ +
Sbjct: 700 CYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKKIKCGHCEATGEQGHHPLICPKKKE 756
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 37.1 bits (82), Expect = 0.027
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 670 CAFCKNNGENEECYSSHALKDWRGRVLCPVLRAFRCPRCGATGDRAHTIKYCPENSD 840
C C++ E SSH ++ G + C ++ +C C ATG++ H CP+ +
Sbjct: 697 CYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKKIKCGHCEATGEQGHHPLICPKKKE 753
>U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related
protein 2 protein.
Length = 259
Score = 31.9 bits (69), Expect = 1.00
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 775 CPRCGATGDRAHTIKYCPENSDASLFVTGSDRSGSLSARR 894
C CGA G+ HT YCP + LF D S RR
Sbjct: 195 CKICGARGEMNHTETYCPMKPSSQLFF-NEDFSRDFENRR 233
>Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 448
Score = 30.3 bits (65), Expect = 3.0
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 589 PSLLYEFLQEVAKVRSDRRMRRALPNECAFCKN--NGENEECYSSHALKDWRGRVLCPVL 762
PS++ + A+ S R R P+EC+ C NG + + S + K + R LC
Sbjct: 23 PSIIQKEPNRTARSESPARQRHQRPSECSICGKTANGYHYDVPSCNGCKTFFRR-LCVSE 81
Query: 763 RAFRCPRCG 789
++F C G
Sbjct: 82 KSFICKAGG 90
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 572 YYVRFDLVSCTSFCRRSLKFAVIEECAGLYLTNAH 676
Y R V S R K AV + C G+Y+TN+H
Sbjct: 325 YLTRPICVEAFSTQSRPNKLAVTDSCGGVYITNSH 359
>U41996-5|AAA83474.1| 296|Caenorhabditis elegans Hypothetical
protein F38E1.6 protein.
Length = 296
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 521 KLLMRKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK 402
KL MR+ + + FL T+ + FHR+++ TD+ R+
Sbjct: 152 KLYMRRFITVLFTIFLINHTVRIFFHRIEEVTDNDMKVRE 191
>U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical
protein T02G5.11 protein.
Length = 184
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 775 CPRCGATGDRAHTIKYCPENSDASL 849
C CGA G+ HT YCP + L
Sbjct: 120 CKICGARGEMNHTETYCPMKPSSQL 144
>Z81142-9|CAB03501.2| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 9.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 418 PESVASSNLWNDNSSVSGARNGEMMDTF 501
P+ + ++NL+N+ S++ G EM+D F
Sbjct: 41 PQCIYTANLYNNRSAIPGLFTSEMVDIF 68
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 787 GATGDRAHTIKYCPENSDASLFVTGSDR 870
GA DR +I+ CP N ++FV G ++
Sbjct: 364 GAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 787 GATGDRAHTIKYCPENSDASLFVTGSDR 870
GA DR +I+ CP N ++FV G ++
Sbjct: 364 GAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 787 GATGDRAHTIKYCPENSDASLFVTGSDR 870
GA DR +I+ CP N ++FV G ++
Sbjct: 158 GAAKDRMLSIEQCPNNKAVTIFVRGGNK 185
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 787 GATGDRAHTIKYCPENSDASLFVTGSDR 870
GA DR +I+ CP N ++FV G ++
Sbjct: 364 GAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
>L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical
protein C02F5.12 protein.
Length = 380
Score = 28.7 bits (61), Expect = 9.3
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 370 LFDDMDPNHNYFLGGRPESVASSNLWNDNSSVSGARNGEMMDTFDFLIKSLSSANNYVSM 549
LFDD DP N + G SS++ +D SS E++D + ++ S ++++ S+
Sbjct: 128 LFDDWDPTANLDIPG-----TSSDIPSDPSSALKVPKKEVLDESEEILDQTSGSSSF-SL 181
Query: 550 LTREQLSVL-RSIRPSLLYEFLQEVAKVRSD 639
EQ + R+I LL + + +K++++
Sbjct: 182 NDSEQANEQERNIIEDLLRQQMFTESKIKNE 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,688,789
Number of Sequences: 27780
Number of extensions: 523997
Number of successful extensions: 1347
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3547715720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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