Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E11
         (1314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   1.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   5.9  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 800 KLRQMLAVLLSYYWARLHSHPSLVVYALTSSY 705
           K+   + +L    WA  H+   L VYA  S Y
Sbjct: 270 KMLSAVVILFFICWAPFHTQRLLYVYAQESDY 301


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
            protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 1008 SGHTVKCFWG 1037
            SGHTV+CF G
Sbjct: 293  SGHTVRCFTG 302


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 483 LLVSVFGWLPGLVAQLTFISL 421
           L V+V  W  G+ A LT+ISL
Sbjct: 79  LFVTVPRWRNGIPATLTYISL 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,344
Number of Sequences: 438
Number of extensions: 6140
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45263751
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)