Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_E08
(1355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.016
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.016
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.016
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 35 0.15
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.46
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.46
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.61
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 1.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.3
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 3.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 4.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 4.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 4.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 4.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 5.7
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 5.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 7.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 7.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 7.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGG--XXPPPP 531
G P I PPPPP PP PPGG PPPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 611 PPPPPXXXXXIXX--PPXXPPGGXXPPPPXXXXXXFFK 504
PPPPP I PP PP G PPPP FK
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPP 537
PPPPP PP PP G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXP----PPP 531
P I PPPP PP PPGG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Frame = -1
Query: 611 PPPPPXXXXXI--XXPPXXPPGGXXP----PPP 531
PPPPP I PP PPGG P PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PG PPPPP PP PPG P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXX--IXXPPXXPPGGXXPP 537
G P I PPPPP PP PP G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGG--XXPPPP 531
G P I PPPPP PP PPGG PPPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 611 PPPPPXXXXXIXX--PPXXPPGGXXPPPPXXXXXXFFK 504
PPPPP I PP PP G PPPP FK
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPP 537
PPPPP PP PP G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXP----PPP 531
P I PPPP PP PPGG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Frame = -1
Query: 611 PPPPPXXXXXI--XXPPXXPPGGXXP----PPP 531
PPPPP I PP PPGG P PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PG PPPPP PP PPG P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXX--IXXPPXXPPGGXXPP 537
G P I PPPPP PP PP G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGG--XXPPPP 531
G P I PPPPP PP PPGG PPPP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 611 PPPPPXXXXXIXX--PPXXPPGGXXPPPPXXXXXXFFK 504
PPPPP I PP PP G PPPP FK
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPP 537
PPPPP PP PP G PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXP----PPP 531
P I PPPP PP PPGG P PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Frame = -1
Query: 611 PPPPPXXXXXI--XXPPXXPPGGXXP----PPP 531
PPPPP I PP PPGG P PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PG PPPPP PP PPG P P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXX--IXXPPXXPPGGXXPP 537
G P I PPPPP PP PP G PP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
G P +F PPPP PP PP G PPPP
Sbjct: 697 GVPPMFNLNAPPPPGIPGY---PPAPPPPGVGPPPP 729
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPP------GGXXPPPP 531
G PG+ PPPPP PP PP G PPPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXI---XXPPXXPPG----GXXPPPP 531
G PG+ PPPPP PP PPG G PPPP
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPP P PP P G PPPP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPP 300
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
P PPP + PP PP G P PP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPP 311
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 644 QXGSPGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
Q G G + PPPPP PP P G P PP
Sbjct: 253 QSGYQGQYPPVPPPPPSVTP--MPPPMPPTPGMTPRPP 288
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP P G PPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMP--GMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPP------GGXXPPPP 531
G PG+ PPPPP PP PP G PPPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXI---XXPPXXPPG----GXXPPPP 531
G PG+ PPPPP PP PPG G PPPP
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPP P PP P G PPPP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPP 310
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
P PPP + PP PP G P PP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPP 321
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 644 QXGSPGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
Q G G + PPPPP PP P G P PP
Sbjct: 263 QSGYQGQYPPVPPPPPSVTP--MPPPMPPTPGMTPRPP 298
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP P G PPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMP--GMPPPPP 331
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.61
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPP-----GGXXPPPP 531
PPPPP PP PP GG PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPP 537
PPPPP PP PPGG P
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP I PP GG PPPP
Sbjct: 84 PPPPPMFAGGIPPPPPM-MGGIPPPPP 109
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 632 PGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
P +F PPPP I PP P G PPPP
Sbjct: 87 PPMFAGGIPPPPPMMGGI--PPPPPMFGAPPPPP 118
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 605 PPPXXXXXIXXPPXXPPGGXXPPPP 531
PPP I PP GG PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPP 99
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
G PG + PP P PP PGG PPPP
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYG-PPQGGPGGFGPPPP 438
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -1
Query: 635 SPGIFXXXPPPPPXXXXXIXXPP-XXPPGGXXPPP 534
SP F PPP PP PPG PPP
Sbjct: 360 SPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPP 394
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPP PP PP PPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPP P I P PP PPPP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPP 66
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 623 FXXXPPPPPXXXXXIXXPPXXPPGGXXPPP 534
F PPPPP PP P PPP
Sbjct: 16 FRKQPPPPPSPRRAPPPPPHRKPASLSPPP 45
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP PP PPPP
Sbjct: 55 PPPPPCPAQFCPPPPICPP---PPPPP 78
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 608 PPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPP I P PP PPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPP 521
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPP 534
PPPPP I PP PP PPP
Sbjct: 252 PPPPPPCPMPIPCPP-PPPACSCPPP 276
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP PP PPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPP----PPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP PP PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP----PPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP PP PP PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP----PPPP 242
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 608 PPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPP I PP GG PPPP
Sbjct: 770 PPPPPPPSAIPLPPRL-QGGIPPPPP 794
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 638 GSPGIFXXXPPPPPXXXXXIXXPPXXPPGGXXPPPP 531
G G PPPPP PP GG PPPP
Sbjct: 25 GGGGCGCGAPPPPPACAP----PPAPACGGGAPPPP 56
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 608 PPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPP I PP GG PPPP
Sbjct: 770 PPPPPPPSAIPLPPRL-QGGIPPPPP 794
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 1293 PXXPGXGXFXFPPXXPXXXXPXGPP 1219
P PG G +PP P P GPP
Sbjct: 799 PGAPGGGGGMYPPLIPTRPGPGGPP 823
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPP P + PP PG PP P
Sbjct: 144 PPPVPEVSEPVPEPPIPAPGPVAPPTP 170
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 626 IFXXXPPPP-PXXXXXIXXPPXXPPGGXXPPPP 531
+F PPPP P + PP PP PPP
Sbjct: 202 MFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPP 234
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 1293 PXXPGXGXFXFPPXXPXXXXPXGPP 1219
P PG G +PP P P GPP
Sbjct: 799 PGAPGGGGGMYPPLIPTRPGPGGPP 823
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP I PP PPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPP 93
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP P PP G PPPP
Sbjct: 272 PPPPPTGS------PPPPPAGGSPPPP 292
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -1
Query: 611 PPPPPXXXXXIXXP--PXXPPGGXXPPPP 531
PPPPP + P PP PPPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP P PP G PPPP
Sbjct: 293 PPPPPTGS------PPPPPAGGSPPPP 313
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -1
Query: 611 PPPPPXXXXXIXXP--PXXPPGGXXPPPP 531
PPPPP + P PP PPPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 611 PPPPPXXXXXIXXPPXXPPGGXXPPPP 531
PPPPP P PP G PPPP
Sbjct: 278 PPPPPTGS------PPPPPAGGSPPPP 298
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -1
Query: 611 PPPPPXXXXXIXXP--PXXPPGGXXPPPP 531
PPPPP + P PP PPPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,127,923
Number of Sequences: 27780
Number of extensions: 322906
Number of successful extensions: 1689
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3819250826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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