Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E06
         (1257 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3129|AAF49172.1|  681|Drosophila melanogaster CG9619-PA...    66   1e-10
AY058304-1|AAL13533.1| 1097|Drosophila melanogaster GH06573p pro...    37   0.067
AE014135-76|AAS64609.1| 1150|Drosophila melanogaster CG2052-PA, ...    37   0.067
AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB, ...    37   0.067
AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM...    32   1.9  
AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA...    32   1.9  
AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD...    32   1.9  

>AE014296-3129|AAF49172.1|  681|Drosophila melanogaster CG9619-PA
           protein.
          Length = 681

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
 Frame = +1

Query: 286 TQMSGDRAGSPCGLTSILPM----SCRGRAVAFARHLQTRLRNLSGTQDEDCE------- 432
           T  S   +  PC + SI+P     SCRGRA AFAR L ++LR L     E+ E       
Sbjct: 10  THTSTPDSRPPCSIISIIPTIGMSSCRGRAEAFARSLSSKLRTLGSQTTEEGEGNAEDEP 69

Query: 433 -------SSWLTRENAQLNRPPTSPGQRDHDTFYDFELECESPCSPIDECDH 567
                  ++W+   +++       P + + D+F+DF+ E ESP SP+DEC++
Sbjct: 70  IINGTSTNTWVNSHDSEQTVTDLQPLRHESDSFFDFDCELESPGSPVDECEY 121


>AY058304-1|AAL13533.1| 1097|Drosophila melanogaster GH06573p
           protein.
          Length = 1097

 Score = 36.7 bits (81), Expect = 0.067
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 520 ELECESPCSPIDECDHPFPERSPTEDQDLPFYDVDSDPEIKE 645
           E++ ++P  P+DEC HP  +          +YDV +DP+ +E
Sbjct: 171 EMDAKTPLQPLDECPHPLVQAQAQSQYGGDYYDV-ADPQARE 211


>AE014135-76|AAS64609.1| 1150|Drosophila melanogaster CG2052-PA,
           isoform A protein.
          Length = 1150

 Score = 36.7 bits (81), Expect = 0.067
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 520 ELECESPCSPIDECDHPFPERSPTEDQDLPFYDVDSDPEIKE 645
           E++ ++P  P+DEC HP  +          +YDV +DP+ +E
Sbjct: 224 EMDAKTPLQPLDECPHPLVQAQAQSQYGGDYYDV-ADPQARE 264


>AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB,
           isoform B protein.
          Length = 1140

 Score = 36.7 bits (81), Expect = 0.067
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 520 ELECESPCSPIDECDHPFPERSPTEDQDLPFYDVDSDPEIKE 645
           E++ ++P  P+DEC HP  +          +YDV +DP+ +E
Sbjct: 224 EMDAKTPLQPLDECPHPLVQAQAQSQYGGDYYDV-ADPQARE 264


>AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO A
            protein.
          Length = 3201

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 403  LSGTQDEDCESSWLTR---ENAQLNRPPTSPGQRDHDTFYDFELECESPCSPIDECDHP 570
            L+ ++ +     W++R   E   +  PPT P   D+D + D+ L       PI E D P
Sbjct: 1997 LTYSRKDSSNQVWISRNTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLP 2055


>AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA,
            isoform A protein.
          Length = 3198

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 403  LSGTQDEDCESSWLTR---ENAQLNRPPTSPGQRDHDTFYDFELECESPCSPIDECDHP 570
            L+ ++ +     W++R   E   +  PPT P   D+D + D+ L       PI E D P
Sbjct: 1997 LTYSRKDSSNQVWISRNTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLP 2055


>AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD,
            isoform D protein.
          Length = 3183

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 403  LSGTQDEDCESSWLTR---ENAQLNRPPTSPGQRDHDTFYDFELECESPCSPIDECDHP 570
            L+ ++ +     W++R   E   +  PPT P   D+D + D+ L       PI E D P
Sbjct: 1997 LTYSRKDSSNQVWISRNTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLP 2055


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,847,963
Number of Sequences: 53049
Number of extensions: 986120
Number of successful extensions: 3254
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3248
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6743497755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)