Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E05
         (1362 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    44   4e-06
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   6.1  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 43.6 bits (98), Expect = 4e-06
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +1

Query: 589 GSLARYLGIFSSHGVNLSHIESRSSTRRPGYEF--MVECEHGSGDFGAALEELKKNVGYL 762
           GSLAR L    +    ++H+ESR S ++ G +F  +V+ +         +  L+++    
Sbjct: 99  GSLARILKTIENFKGTVTHVESRPS-KKEGLQFDVLVKVDMTRQYLLQLIRNLRQSSALD 157

Query: 763 NIISRNYKDNRSAV--PWFPRRIRDLDRFANQILSYGAELDSDHPG 894
            +      DN  ++  PWFPR   DLD   + +  +  +LD +HPG
Sbjct: 158 GVTL--LADNSVSIKDPWFPRHASDLDNCNHLMTKFEPDLDMNHPG 201



 Score = 39.1 bits (87), Expect = 9e-05
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 896 FTDPVYRDRRKYFADMAYNYKHGXPLPYVEYTK 994
           F D  YR RRK+ A++A+ Y++G  +P V YT+
Sbjct: 202 FADKEYRARRKFIAEIAFAYRYGDAIPTVPYTE 234


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 220 IFNGDQHAGGVRPAQQRPSLVAD 288
           + +G QHAGG +    +P  V D
Sbjct: 924 VASGQQHAGGWQSIYAQPQTVQD 946


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,091
Number of Sequences: 438
Number of extensions: 7912
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 47184759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)