Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_E01
         (1256 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-3|AAK18862.2|  201|Caenorhabditis elegans Hypothetical pr...    61   1e-09
U32305-2|AAZ82852.1|  204|Caenorhabditis elegans Hypothetical pr...    61   1e-09
Z68108-1|CAA92134.1|  194|Caenorhabditis elegans Hypothetical pr...    33   0.32 
U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine rece...    31   1.7  
Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical p...    31   2.3  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    29   6.9  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    29   6.9  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      29   6.9  

>U32305-3|AAK18862.2|  201|Caenorhabditis elegans Hypothetical
           protein B0336.5a protein.
          Length = 201

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
 Frame = +1

Query: 301 RFL-DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGK------DLCDCLDEK 459
           RFL D+ D  ++ R +R A  K+    R     +D  G ++ T K      DLCDCL  +
Sbjct: 86  RFLPDSVDIISTNRSKRVAAEKQA-DLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVE 144

Query: 460 CPGCHFPCANCNSNKCGHECRINRKWMYDKIE 555
           C GCH+PC  C S KC   CR NRK M  ++E
Sbjct: 145 CDGCHWPCKQCKSRKCLIGCRQNRKEMVIRVE 176


>U32305-2|AAZ82852.1|  204|Caenorhabditis elegans Hypothetical
           protein B0336.5b protein.
          Length = 204

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
 Frame = +1

Query: 301 RFL-DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGK------DLCDCLDEK 459
           RFL D+ D  ++ R +R A  K+    R     +D  G ++ T K      DLCDCL  +
Sbjct: 89  RFLPDSVDIISTNRSKRVAAEKQA-DLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVE 147

Query: 460 CPGCHFPCANCNSNKCGHECRINRKWMYDKIE 555
           C GCH+PC  C S KC   CR NRK M  ++E
Sbjct: 148 CDGCHWPCKQCKSRKCLIGCRQNRKEMVIRVE 179


>Z68108-1|CAA92134.1|  194|Caenorhabditis elegans Hypothetical
           protein T05A10.2 protein.
          Length = 194

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = -3

Query: 672 EVEYFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISFYFNFVIHPFSVNSALMATFIGI 493
           E++ + K+VA   IC I  L  +++ FV  F       +  +++HP S  S L+  F+ +
Sbjct: 73  EMKPYEKIVA---ICMIAALILEIVAFVWNFLTSCTCCFKKYLLHPLSPLSFLITIFLTV 129

Query: 492 AV 487
           A+
Sbjct: 130 AI 131


>U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein39 protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/82 (24%), Positives = 37/82 (45%)
 Frame = -3

Query: 663 YFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISFYFNFVIHPFSVNSALMATFIGIAVC 484
           + FK V+N  +   ++L+  +++  +IF+    SFYF F I    ++SA     +     
Sbjct: 184 FSFKPVSNTMLITTVLLFSLVILIQVIFFTGF-SFYFLFSIERSKMSSATRKLQLKFFYT 242

Query: 483 TWKMASGTLLIEAITQVFASFS 418
           TW      L +  +   +  FS
Sbjct: 243 TWLQMLTHLAVIILPMGYTFFS 264


>Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical
           protein D1054.12 protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/85 (23%), Positives = 36/85 (42%)
 Frame = -3

Query: 738 LYGKSIVHNAVHCTDLPEDGELEVEYFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISF 559
           L G++ V   + C  +P+D      YF   + N   C  +I  F L++   +++   I +
Sbjct: 163 LQGRATVQQEIPC--IPKDVINRPGYFVLSIVNTIPCLCLIFMFSLIIPQALYFVLSIFW 220

Query: 558 YFNFVIHPFSVNSALMATFIGIAVC 484
           Y    +    V + L   F   A+C
Sbjct: 221 YLYHTVSKSQVTNRLQKQFF-FALC 244


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 445 CLDEKCPGCHFPCANCNSNKC 507
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 445 CLDEKCPGCHFPCANCNSNKC 507
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 445 CLDEKCPGCHFPCANCNSNKC 507
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,893,244
Number of Sequences: 27780
Number of extensions: 392319
Number of successful extensions: 1670
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3495543430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)