Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D22
(1239 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 233 5e-60
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 2e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 89 2e-16
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 83 1e-14
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 76 2e-12
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 72 4e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 62 3e-08
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 61 7e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 5e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-07
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.019
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.076
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 40 0.13
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.13
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 5.0
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 8.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 8.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 8.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 233 bits (571), Expect = 5e-60
Identities = 108/122 (88%), Positives = 109/122 (89%)
Frame = +2
Query: 461 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 640
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 641 CRLPDTCPPFSLREAWRFLIAHAVGISXRCRSFAPXWAVCTNPPFXPTXXPYPVTIVLSP 820
CRLPDTCPPFSLREAWRFLIAHAVGIS RCRSFAP WAVCTNPPF PT PYPVTIVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 821 TR 826
TR
Sbjct: 122 TR 123
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 2e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +2
Query: 293 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 472
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 473 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 652
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 479 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 640
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 89.4 bits (212), Expect = 2e-16
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = -3
Query: 832 VLPGWTQDDSYRIRXXGRXERGVXAHSPXWSERPTPX*DTYSVSYEKAPRFPKGERRTGI 653
V PGWTQDDSYR R ERGV A+SP WSERP P DT SVSYEKAPRFPKG++ +
Sbjct: 6 VRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65
Query: 652 R*AAGSEQESARGSFQG 602
+G Q R + +G
Sbjct: 66 ---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 672 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 553
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 83.0 bits (196), Expect = 1e-14
Identities = 45/91 (49%), Positives = 48/91 (52%)
Frame = +2
Query: 554 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISXRCR 733
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 734 SFAPXWAVCTNPPFXPTXXPYPVTIVLSPTR 826
SFAP WAV NPPF PT PYPVT+ LSPTR
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 75.8 bits (178), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 619 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLXSV 729
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 71.7 bits (168), Expect = 4e-11
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -3
Query: 829 LPGWTQDDSYRIRXXGRXERGVXAHSPXWSERPTP 725
LPGWTQDDSYRIR GR ERGV AHSP WSERPTP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 469 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 356
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 62.1 bits (144), Expect = 3e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -3
Query: 826 PGWTQDDSYRIRXXGRXERGVXAHSPXWSERPTPX*DT 713
PGWTQ +SYRIR R ERGV A+SP WSERPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 60.9 bits (141), Expect = 7e-08
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +1
Query: 757 VHXPPVXPDRXXLSGNYRLESNPVXHXLSPLAXXTG 864
+H PPV PDR LSGNYRLESNPV H LSPLA TG
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATG 36
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 269 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 436
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 5e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 368 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 541
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 542 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 640
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 388 HSKAVIRLSTESGDNAGKNM 447
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.019
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 75 PDMIRYIDEFGQTTTRMQ 128
PDMIRYIDEFGQTTTRMQ
Sbjct: 347 PDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.076
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 267 SALMNRPTRGERRFAYW 317
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 39.9 bits (89), Expect = 0.13
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 758 CTNPPFXPTXXPYPVTIVLSPTR*XTXYXHW 850
CTN PF PT P VT++L+PT T HW
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPTLTDTQKRHW 98
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.13
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 339 ERGSGRAPNTQTASPRALADSLMQ 268
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 5.0
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 699 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 595
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 8.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 478 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 356
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 8.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 150 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 317
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 8.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 230 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWXQL 66
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,107,173
Number of Sequences: 1657284
Number of extensions: 16210210
Number of successful extensions: 45315
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45279
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125125458531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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