Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D21
(1267 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 136 3e-32
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 7e-24
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 91 1e-18
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 82 1e-15
06_01_0671 - 4899611-4899829,4900870-4901448 71 3e-12
02_01_0691 - 5167260-5167937 41 0.002
01_03_0105 + 12604125-12604583 32 0.83
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 32 1.1
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 30 4.4
07_03_0575 - 19637277-19637681 29 5.9
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 5.9
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 29 5.9
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 5.9
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917 29 7.8
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 136 bits (330), Expect = 3e-32
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = +2
Query: 341 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 520
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 521 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 682
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 97.1 bits (231), Expect = 3e-20
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 47 ASHSPVLSVXVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLF 223
AS S + ++ + PL K AP F A AV + EF ++ LSDY GK YV+LF
Sbjct: 46 ASSSRSARASSFVARAGGVDDAPLVGNK-APDFDAEAVFDQEFINVKLSDYIGKKYVILF 104
Query: 224 FYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDS 337
FYPLDFTFVCPTEI AFS++ DEF K+ E+LG S DS
Sbjct: 105 FYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect(2) = 7e-24
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +2
Query: 446 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 622
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 623 NWRPGAKTIKPDTKAAQEYF 682
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect(2) = 7e-24
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 245 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 337
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 91.5 bits (217), Expect = 1e-18
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Frame = +2
Query: 182 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 358
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 359 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQ 520
I + P+++D S + ++D + G +P R L I+ + ++
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176
Query: 521 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 655
+ VGR+++E +R V A Q KH P NW+PG + + P
Sbjct: 177 SFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 81.8 bits (193), Expect = 1e-15
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Frame = +2
Query: 182 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 358
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 359 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQ 520
I + P+++D R ++D ++T +P R L I+ + ++
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141
Query: 521 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 676
+ GR++ E LR A +H P NW+PG + + P + +E
Sbjct: 142 SFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 70.5 bits (165), Expect = 3e-12
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +2
Query: 182 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 361
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 362 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDL 538
+K+ L P L+SD+ +++ +++GV + G +P R +++D ++ I N
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQF 249
Query: 539 PVGRSVEETLRLVQA 583
+ + ETL+++Q+
Sbjct: 250 QPEKHIGETLKILQS 264
>02_01_0691 - 5167260-5167937
Length = 225
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +2
Query: 164 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 334
+GE K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 335 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 451
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 32.3 bits (70), Expect = 0.83
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 391 SHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 540
SH+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 610 GVPRQLEARRQDHQARHQGRAGVLRRRQLDTTP 708
G P + EAR+ D++A GR+ V+ R+ +T P
Sbjct: 395 GKPPKFEARKMDYKATESGRSLVIPEREYETEP 427
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 565 GLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRDVHG 392
G+L +G+VVD L + ++DD E +L +H A +R + RDV G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 5.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 420 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 247
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 601 LVRELERLHQPQGLLHRPPHGQVVDGDLPEVLL 503
+VRE E+LHQ G P DLPE LL
Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 358 DQHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQR 534
+Q ++QAG P+ + P + + + G P+PR H+R + Q+ H QR
Sbjct: 616 NQRSSQAGTIDIDSKPAGGSKGNP-INIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQR 673
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 371 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 529
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
Length = 447
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 361 QHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAE 510
QH A+A R R + DK + H PR+ R HP R +++AE
Sbjct: 166 QHRARAARLRLLD--DDKEKPLLHTPRMMPTRRSPHHPRFRHQQQQQEAE 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,375,003
Number of Sequences: 37544
Number of extensions: 459243
Number of successful extensions: 1654
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3922562724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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