Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D21
(1267 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 312 3e-85
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 266 2e-71
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 72 1e-12
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z46935-4|CAA87051.1| 270|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z18854-1|CAA79306.1| 270|Caenorhabditis elegans capping protein... 29 5.3
Z18806-1|CAA79270.1| 270|Caenorhabditis elegans capping protein... 29 5.3
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 29 7.0
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 29 9.2
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 312 bits (767), Expect = 3e-85
Identities = 143/185 (77%), Positives = 160/185 (86%)
Frame = +2
Query: 128 KPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 307
KPAPQFK AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I
Sbjct: 8 KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAIN 67
Query: 308 CEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 487
VL ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGL
Sbjct: 68 TVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGL 127
Query: 488 FIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKA 667
FIID QNLRQITINDLPVGRSV+ETLRLVQAFQF +KHGEVCPA W PG+ TIKP K
Sbjct: 128 FIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKPGVKE 187
Query: 668 AQEYF 682
+QEYF
Sbjct: 188 SQEYF 192
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 266 bits (652), Expect = 2e-71
Identities = 116/190 (61%), Positives = 151/190 (79%)
Frame = +2
Query: 113 PLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADE 292
PL P FK TAVV+G+FK IS DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+E
Sbjct: 32 PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91
Query: 293 FRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGI 472
FR +G EV+ S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+ +GVLD+E+G+
Sbjct: 92 FRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGL 151
Query: 473 PFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIK 652
+RGLF+ID +R T NDLPVGRSV+ETLR+++AFQF+DKHGEVCPA+W + TIK
Sbjct: 152 SYRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIK 211
Query: 653 PDTKAAQEYF 682
P ++EYF
Sbjct: 212 PGVATSKEYF 221
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 71.7 bits (168), Expect = 1e-12
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Frame = +2
Query: 176 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHL 352
K+ +L +Y G+ +++LF +P DFT VC TE+ + A EFRK ++L S DS TH
Sbjct: 18 KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77
Query: 353 AW---INTPRKQGGLGP-MNIPLISDKSHRISRDYGVLD------EETGIPFRGLFIIDD 502
W IN+ + G + +I+D I + G++D E + R + +
Sbjct: 78 DWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSARAVMLFGP 137
Query: 503 KQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 649
+ L+ + GR+ E LR+V Q K PANW G I
Sbjct: 138 DKKLKSKILYPATFGRNFVEILRMVDGVQLGTKAPVATPANWIAGDNVI 186
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 29.9 bits (64), Expect = 4.0
Identities = 25/94 (26%), Positives = 37/94 (39%)
Frame = -2
Query: 705 CRV*LASPKYSCAALVSGLMVLAPGLQLAGHTSPCLSVNWNACTSRRVSSTDLPTGRSLM 526
C AS +YSC+ S A Q TS C+ +C+ + S+T+ +
Sbjct: 38 CSCQQASQQYSCSCQPSTPCSCASSQQYQLQTSQCMPACQQSCSQQCQSNTNTQCQPTCQ 97
Query: 525 VICLRFCLSSMMKSPRKGMPVSSSSTP*SREMRC 424
C + M +P +P S S P E RC
Sbjct: 98 QSCQTSSCNPMTSTP---IPASQSCLP-ECENRC 127
>Z46935-4|CAA87051.1| 270|Caenorhabditis elegans Hypothetical
protein M106.5 protein.
Length = 270
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +2
Query: 344 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 523
T + W+ T + G+ MN+ + H + D + D+ T + G I D + +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225
Query: 524 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 613
TIN++ G+ T +++ + T+K E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251
>Z18854-1|CAA79306.1| 270|Caenorhabditis elegans capping protein
beta subunit protein.
Length = 270
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +2
Query: 344 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 523
T + W+ T + G+ MN+ + H + D + D+ T + G I D + +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225
Query: 524 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 613
TIN++ G+ T +++ + T+K E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251
>Z18806-1|CAA79270.1| 270|Caenorhabditis elegans capping protein
beta subunit protein.
Length = 270
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +2
Query: 344 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 523
T + W+ T + G+ MN+ + H + D + D+ T + G I D + +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225
Query: 524 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 613
TIN++ G+ T +++ + T+K E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 29.1 bits (62), Expect = 7.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 158 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 319
V N D+SLSDYKGK V++ + E D ++K G EVL
Sbjct: 9 VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVL 61
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 541 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 446
GQV GDL L+ V +E S+ D + ++HS
Sbjct: 331 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 541 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 446
GQV GDL L+ V +E S+ D + ++HS
Sbjct: 353 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 541 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 446
GQV GDL L+ V +E S+ D + ++HS
Sbjct: 355 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,726,318
Number of Sequences: 27780
Number of extensions: 374719
Number of successful extensions: 1199
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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