Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D20
         (1240 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0702 + 20820796-20821495,20821569-20822119,20822254-20823018     33   0.61 
06_03_0615 - 22761375-22761760,22762218-22765026                       31   2.5  
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219...    30   4.3  
11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928     29   5.7  
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949...    29   5.7  
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886...    29   10.0 

>07_03_0702 + 20820796-20821495,20821569-20822119,20822254-20823018
          Length = 671

 Score = 32.7 bits (71), Expect = 0.61
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 335 PRSGTASAKSKANFRRLACSLTLSEVCNIVGTTM 436
           P +GTA++  +  FR  A S T++ +C+IVGT +
Sbjct: 493 PNAGTAASAGRFAFRAFAVSDTMAFLCSIVGTCL 526


>06_03_0615 - 22761375-22761760,22762218-22765026
          Length = 1064

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +3

Query: 387 RVALLSLKSVILWEQQWHPCAIVGSMTIIYLLIWLL 494
           R AL ++K+VIL       CA++GS+T++ +++W+L
Sbjct: 700 RTALKTVKTVIL------VCAVLGSITLLLVVVWIL 729


>06_03_0181 +
           17618888-17619125,17621503-17621683,17621765-17621906,
           17622002-17622071,17622162-17622307,17623382-17623948,
           17624558-17624641,17624723-17624797,17625049-17625217,
           17625395-17625586,17625662-17626053
          Length = 751

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 414 VILWEQQWHPCAIVGSMTIIYLLIWLLD--LNTLASIAIVGLI 536
           V+LW+ +     ++G  T+I++L  +LD  L TL S  ++G +
Sbjct: 83  VLLWKDKKTSAVVIGGATVIWILFEVLDYHLLTLLSHVMIGAL 125


>11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928
          Length = 839

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
 Frame = -3

Query: 734 DGDSVIHKWA----GISQGIE*-MDVNHQ---FIVAYYNVSTNFFKCLLMLSC-PRTRSI 582
           D D+++  W+     I  G+E  + VN+      V+YYN+  +   CLL LSC P   +I
Sbjct: 304 DRDNILEYWSKVYHSIGSGLEDNLHVNNMRKILSVSYYNLPPHLRACLLYLSCYPEDTNI 363

Query: 581 --KLVAYNW 561
             K V + W
Sbjct: 364 GNKDVIWKW 372


>02_02_0367 +
           9496893-9497022,9498262-9498442,9498519-9498660,
           9498757-9498826,9498920-9499089
          Length = 230

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +3

Query: 414 VILWEQQWHPCAIVGSMTIIYLLIWLLDLN--TLASIAIVGLI 536
           V+LW+ +    A++G  T++++L  ++D +  TL S  ++G++
Sbjct: 47  VLLWKDKKISAAVIGGATVLWVLFEVVDYHFLTLISHVLIGVL 89


>05_03_0142 -
           8866316-8866608,8867652-8867886,8868801-8869076,
           8869166-8869292,8869869-8870116,8870189-8871104,
           8871980-8872086,8872562-8872930
          Length = 856

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 702 YLAGNRMNGCKSPIYCSLLQCFYKFLQMSSHVVLSK 595
           YL  +   GC    +C +L C  K  Q+S+H+ L K
Sbjct: 438 YLHRDNPEGCSLCPFCLVLPCLGKLQQISNHLELIK 473


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,183,631
Number of Sequences: 37544
Number of extensions: 509471
Number of successful extensions: 1282
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3817805856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)