Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D20
         (1240 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.              115   3e-25
BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation factor...   115   3e-25

>D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.
          Length = 226

 Score =  115 bits (277), Expect = 3e-25
 Identities = 46/172 (26%), Positives = 95/172 (55%)
 Frame = +3

Query: 351 QVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIIYLLIWLLDLNTLASIAIVG 530
           +   ++  L+GW   +L    V+ WE+ W P AI+G +++++L+I+ LD + L+ ++   
Sbjct: 38  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSVLSGVSCFV 97

Query: 531 LILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICRNIVISYNKLVIYIHSFYSLRDTSP 710
           + L   D++VP++  +++GS+ WT + ++ F EIC N+V +  + V +    ++L++  P
Sbjct: 98  MFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKP 157

Query: 711 FMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGIFNSFFSV 866
            MY+   I +L  VAW+   ++N+             PG+ + GI   +  +
Sbjct: 158 KMYFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGIILKYIGM 209


>BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation
           factor-like 6 interacting protein 1 protein.
          Length = 203

 Score =  115 bits (277), Expect = 3e-25
 Identities = 46/172 (26%), Positives = 95/172 (55%)
 Frame = +3

Query: 351 QVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIIYLLIWLLDLNTLASIAIVG 530
           +   ++  L+GW   +L    V+ WE+ W P AI+G +++++L+I+ LD + L+ ++   
Sbjct: 15  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSVLSGVSCFV 74

Query: 531 LILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICRNIVISYNKLVIYIHSFYSLRDTSP 710
           + L   D++VP++  +++GS+ WT + ++ F EIC N+V +  + V +    ++L++  P
Sbjct: 75  MFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKP 134

Query: 711 FMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGIFNSFFSV 866
            MY+   I +L  VAW+   ++N+             PG+ + GI   +  +
Sbjct: 135 KMYFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGIILKYIGM 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,352,113
Number of Sequences: 237096
Number of extensions: 3046173
Number of successful extensions: 8927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8927
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17614793600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)