Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D17
         (1344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.051
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   8.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   8.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect(2) = 0.051
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 976  GGPXXGPXPXKGXGGGG 1026
            GG   GP P  G GGGG
Sbjct: 216  GGSSGGPGPGGGGGGGG 232



 Score = 24.2 bits (50), Expect(2) = 0.051
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 856 KXXXPGXXGGGGGXXPPPXGG 918
           K   PG  GGG G   P  GG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGG 216


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 976  GGPXXGPXPXKGXGGGGXXPXXPPPPGXXXKKXPP 1080
            G P       +   GG   P  PPPPG      PP
Sbjct: 511  GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPP 545



 Score = 26.2 bits (55), Expect = 2.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 587 PPXPPXRGXPPPXXXGXXXGG 525
           PP PP  G PP    G   GG
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGG 605



 Score = 24.2 bits (50), Expect = 8.7
 Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
 Frame = +1

Query: 976  GGPXXGPXPXKGXGGG--GXXPXXPPPPGXXXKKXPPPXXGG------GXPPRGXKKXPG 1131
            GGP  GP P    GG      P   PPP    +    P          G P     + P 
Sbjct: 525  GGPL-GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP 583

Query: 1132 VXPGKXPXGPPXXP 1173
              P   P GPP  P
Sbjct: 584  APPPPPPMGPPPSP 597


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +1

Query: 1078 PPXXGGGXPPRGXKKXPGVXPGKXPXGPPXXP 1173
            PP   G   PRG     G      P GPP  P
Sbjct: 46   PPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAP 77



 Score = 24.2 bits (50), Expect = 8.7
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +1

Query: 1015 GGGGXXPXXPPPPGXXXKKXPPPXXGGGXPPRGXKKXPGVXPGKXPXGPPXXP 1173
            G  G  P  PP      ++  PP   G   P+G K  PG+       G P  P
Sbjct: 702  GQKGETPQLPP------QRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAP 748


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 907 GXGXPPPPPXXP 872
           G G PPPPP  P
Sbjct: 779 GIGSPPPPPPPP 790


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
 Frame = +1

Query: 976  GGPXXG-PXPXKGXGGGGXXPXXPPPPGXXXKKXPP---PXXGGGXPPRGXKKXPGVXPG 1143
            G P  G P   +    GG  P  P  P     + PP   P    G  PR         P 
Sbjct: 199  GPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPP 258

Query: 1144 KXPXGPPXXPPXXXG 1188
                 PP  PP   G
Sbjct: 259  MMGQPPPIRPPNPMG 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.161    0.580 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,341
Number of Sequences: 2352
Number of extensions: 12990
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154430100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)