Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D16
         (1306 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PSF3 Cluster: Proline-rich extensin-like family prote...    39   0.33 
UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep...    38   0.43 
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    35   4.0  
UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    35   5.3  
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    35   5.3  

>UniRef50_Q4PSF3 Cluster: Proline-rich extensin-like family protein;
           n=3; Arabidopsis thaliana|Rep: Proline-rich
           extensin-like family protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 249

 Score = 38.7 bits (86), Expect = 0.33
 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
 Frame = -1

Query: 694 PFXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPKTXGXGFFXG 515
           P   +P  PP  +  P  P+     F   PP + +P  PP   + P PPP+     ++  
Sbjct: 138 PVNLSPPPPPVLLSPPPPPV----LFSPPPPTVTRPPPPPTITRSP-PPPRPQAAAYYKK 192

Query: 514 XXGXGPXK---XXPXXPGXXXFXXXKKISXPPPXPXK 413
                P K     P  P         K S PPP P K
Sbjct: 193 TPPPPPYKYGRVYPPPPPPPQAARSYKRSPPPPPPSK 229


>UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep:
           SJCHGC01957 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 180

 Score = 38.3 bits (85), Expect = 0.43
 Identities = 32/86 (37%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
 Frame = +3

Query: 405 FFFFXGXGGGXEIFFXXKK----XXXPGXXGXXFXGPXPFXPXKNPXPXVLGGGXGFXXX 572
           FFFF G GGG   FF   K       PG       GP  F   KNP P   G G G    
Sbjct: 38  FFFFLGGGGGGPPFFAPPKKKGGGPPPGKNLAQRGGPKKFF-LKNPFPVFQGEGGGKTPP 96

Query: 573 XGGXXGXPKNGGXTXKKXXXKRGXKG 650
            G     P  GG T +    +RG KG
Sbjct: 97  RG--PPFPFKGGKT-RGRVPQRGGKG 119


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 35.1 bits (77), Expect = 4.0
 Identities = 21/57 (36%), Positives = 22/57 (38%)
 Frame = -1

Query: 559 PXPPPKTXGXGFFXGXXGXGPXKXXPXXPGXXXFXXXKKISXPPPXPXKKKKXXFFF 389
           P PPP      FF       P    P   G   F   KK   PPP P  +KK  FFF
Sbjct: 46  PPPPPARRQKFFFFPHFFFPPP---PRRGGGGVFFYKKKRGGPPPPPTTQKKKNFFF 99


>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF15000, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 34.7 bits (76), Expect = 5.3
 Identities = 41/145 (28%), Positives = 45/145 (31%), Gaps = 2/145 (1%)
 Frame = -1

Query: 760 SLXXFPPXXWGXXFFXFXXGGGPFXKTPXXPPFXVFXPFXPLXXKXF--FXVXPPFLGKP 587
           S   FPP  +   FF F     PF  +P   P   F P  PL    F  F + PP    P
Sbjct: 140 SFIFFPPLFF---FFPFSFFPPPFPPSPPLSP-PYFPPPPPLPPPPFPLFPLFPP----P 191

Query: 586 XXPPXXXKXPXPPPKTXGXGFFXGXXGXGPXKXXPXXPGXXXFXXXKKISXPPPXPXKKK 407
             PP       PPP +     F       P    P  P    F      S  P  P    
Sbjct: 192 PPPPPPPPFSPPPPPSPPPSLFSPPPFFSPPPSFPPLPPPPYF------SPLPLPPFFLL 245

Query: 406 KXXFFFXIFFSPX*GXPKNPXPXQF 332
              F    FF P    P  P P  F
Sbjct: 246 PFLFPPPPFFFPPKPNPPPPPPPGF 270


>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 34.7 bits (76), Expect = 5.3
 Identities = 24/84 (28%), Positives = 25/84 (29%)
 Frame = -1

Query: 670  PPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPKTXGXGFFXGXXGXGPXK 491
            PP     P  P      +   PP    P  PP     P PPP   G G         P  
Sbjct: 936  PPPSYGSPPPPPPPPPSYGSPPP---PPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSY 992

Query: 490  XXPXXPGXXXFXXXKKISXPPPXP 419
              P  P    F     I  PPP P
Sbjct: 993  GSPPPPPPPPFSHVSSIPPPPPPP 1016


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,108,097
Number of Sequences: 1657284
Number of extensions: 7840738
Number of successful extensions: 15352
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13428
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 134034067229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)