Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D16
         (1306 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   2.6  
07_01_0479 + 3606663-3607448                                           30   3.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   4.6  
07_03_0177 - 14770777-14772045                                         30   4.6  
09_02_0603 - 11150739-11150746,11150791-11151340                       29   8.1  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 22/63 (34%), Positives = 22/63 (34%)
 Frame = -1

Query: 607 PPFLGKPXXPPXXXKXPXPPPKTXGXGFFXGXXGXGPXKXXPXXPGXXXFXXXKKISXPP 428
           PP   K   PP   K P PPP   G          GP    P  PG       KK   PP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPP--PPPPPKGPSPPPPPPPG------GKKGGPPP 379

Query: 427 PXP 419
           P P
Sbjct: 380 PPP 382


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/62 (30%), Positives = 21/62 (33%)
 Frame = -1

Query: 604 PFLGKPXXPPXXXKXPXPPPKTXGXGFFXGXXGXGPXKXXPXXPGXXXFXXXKKISXPPP 425
           PF   P  PP     P PPP      F  G    GP +  P  PG         +  PP 
Sbjct: 186 PFQRPPGVPPAFPGGPPPPP----GPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPF 241

Query: 424 XP 419
            P
Sbjct: 242 RP 243


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 18/54 (33%), Positives = 20/54 (37%)
 Frame = -1

Query: 694 PFXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPKTXG 533
           PF   P  PP     P  P   +  F   PP   +P  PP     P PPP   G
Sbjct: 50  PFLAPPPPPPPGPPPPHQP---QFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYG 100


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = +3

Query: 546 GGGXGFXXXXGGXXGXPKNGGXTXKKXXXKRGXKGXKTXKGGXXG 680
           GGG GF    GG  G    GG        K G  G    KGG  G
Sbjct: 80  GGGGGFGGGGGGGLGGGGGGGLGGGGGFGKGGGVGGGFGKGGGFG 124


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = -1

Query: 694 PFXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPK 542
           PF   P  PP   F P             PP LG    PP   + P PPP+
Sbjct: 40  PFGFPPPPPPGSTFVPLPQSGVPP-----PPPLGSFFVPPPQSRVPPPPPQ 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,645,934
Number of Sequences: 37544
Number of extensions: 340050
Number of successful extensions: 1054
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4073878200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)