Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D16
         (1306 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical ...    34   0.19 
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    29   7.2  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    29   7.2  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    29   7.2  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical
           protein Y66H1A.4 protein.
          Length = 244

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +3

Query: 546 GGGXGFXXXXGGXXGXPKNGGXTXKKXXXKRGXKGXKTXKGGXXGVFXKGPP 701
           GGG GF    GG  G    GG    +    RG +G     GG  G + +GPP
Sbjct: 8   GGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGG--FGGGGRGGYDQGPP 57


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical
           protein F07C4.7 protein.
          Length = 180

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 21/70 (30%), Positives = 22/70 (31%)
 Frame = +3

Query: 471 PGXXGXXFXGPXPFXPXKNPXPXVLGGGXGFXXXXGGXXGXPKNGGXTXKKXXXKRGXKG 650
           PG  G    GP P  P +       GG  G      G  G   NGG         RG  G
Sbjct: 27  PGFGGPGSGGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNG 86

Query: 651 XKTXKGGXXG 680
                GG  G
Sbjct: 87  GFGDNGGLRG 96


>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical
           protein Y48E1B.1 protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/49 (28%), Positives = 16/49 (32%)
 Frame = -1

Query: 691 FXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPP 545
           F   P  PP  +     P          PP +  P  PP     P PPP
Sbjct: 321 FILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 24/93 (25%), Positives = 28/93 (30%)
 Frame = -1

Query: 697 GPFXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPKTXGXGFFX 518
           GP    P  PP  +  P+  +     F   PP    P  PP       PPP       F 
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHF- 327

Query: 517 GXXGXGPXKXXPXXPGXXXFXXXKKISXPPPXP 419
              G GP +     P    F         PP P
Sbjct: 328 ---GMGPPRGFMPPPHPMMFRGGPYPPFFPPPP 357


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 24/93 (25%), Positives = 28/93 (30%)
 Frame = -1

Query: 697 GPFXKTPXXPPFXVFXPFXPLXXKXFFXVXPPFLGKPXXPPXXXKXPXPPPKTXGXGFFX 518
           GP    P  PP  +  P+  +     F   PP    P  PP       PPP       F 
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHF- 327

Query: 517 GXXGXGPXKXXPXXPGXXXFXXXKKISXPPPXP 419
              G GP +     P    F         PP P
Sbjct: 328 ---GMGPPRGFMPPPHPMMFRGGPYPPFFPPPP 357


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 613 VXPPFLGKPXXPPXXXKXPXPPP 545
           + PPF   P  PP     P PPP
Sbjct: 776 IPPPFFALPVPPPPPVPPPPPPP 798


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,315,246
Number of Sequences: 27780
Number of extensions: 216925
Number of successful extensions: 484
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)