Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D15
(1294 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 5.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 7.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 7.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 7.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 7.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 7.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 7.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 7.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 7.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 7.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 7.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 959 IXQHCLINSMINISTWETMNGALPPNSKA 873
I Q +I + N++ W+ ++ ++PP A
Sbjct: 742 IDQSTVIQTGANVNLWQPLSVSIPPPPSA 770
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 211 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 243
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 211 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 243
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 211 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 243
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 222 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 254
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 240 YGFKRCTERVTNRI*CVSNMERYYRKRTVSYFK 338
+GF+ + R + C + R YRK+ Y K
Sbjct: 211 HGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,096
Number of Sequences: 438
Number of extensions: 6864
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44423310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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