Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D12
         (1310 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   6.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   6.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   8.8  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 308 YKFYSPIRDYSKEESPAPKY 367
           + FY+P R+  + + PAP Y
Sbjct: 238 FDFYTPKRNPKEADYPAPLY 257


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 368 SIWGQEIPP*SSL*WENRTCTACSCKPPMVQGWSSCS--KIHQDYAKPDAEYRTQL-HHI 198
           +I+G  + P  +L +E      C+ + P V G   CS    ++D A    + R +  ++I
Sbjct: 79  AIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYI 138

Query: 197 LSPHI 183
             P +
Sbjct: 139 ADPEV 143


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 308 YKFYSPIRDYSKEESPAPKY 367
           + FY+P R+  + + P+P Y
Sbjct: 246 FDFYTPARNPKEADYPSPLY 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,449
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38740897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)