Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D09
         (1299 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    29   0.39 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   4.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   6.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   8.4  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 0.39
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 49  PFGRXHPELCVXSFSNLPASLPTGPPVFVLQRITQFAPG 165
           PF     E+C+  +       P  PPV V  R ++FAPG
Sbjct: 126 PFSAKQKEVCINPYHYKRVESPVLPPVLV-PRHSEFAPG 163


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 272 TYLKDNFPSLWNXINRLYMPRGXPPVGRPS 183
           T     FPS+W     + +P+   P G PS
Sbjct: 500 TLTTGQFPSMWKIQKLVLIPKPGKPPGHPS 529


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 840 KVFNCFDPQLECGVFVTHEKRLRMLL 763
           ++ N F+P LE  + VTH +RL  ++
Sbjct: 754 EILNVFEPYLEGKIPVTHFQRLAFIV 779


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 761 SSNILKRFSCVTKTPHSS*GSKQLNTLR 844
           S+  L+RF      P +S GSK++N  R
Sbjct: 228 STGFLRRFPGTAWPPETSYGSKEINDFR 255


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 17/59 (28%), Positives = 20/59 (33%)
 Frame = +3

Query: 600  QRHQQGAPTGAHRWSRNCYGR*RGHDPHNRSAQVLGACQGCGGRREPHVDGVGLPATSS 776
            QR +  A    H W R       G D      ++     GCGG      D  G  AT S
Sbjct: 1989 QREEYCARLIQHAWKRYKQRHGGGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGS 2047


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,159,944
Number of Sequences: 2352
Number of extensions: 24547
Number of successful extensions: 64
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149601402
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)