Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D09
(1299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical pr... 320 1e-87
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z99281-43|CAJ76962.1| 257|Caenorhabditis elegans Hypothetical p... 31 2.3
Z99281-42|CAB16505.2| 269|Caenorhabditis elegans Hypothetical p... 31 2.3
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 29 9.5
U55373-6|AAC25889.1| 250|Caenorhabditis elegans Hypothetical pr... 29 9.5
U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical pr... 29 9.5
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 9.5
>Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical
protein T03F6.3 protein.
Length = 267
Score = 320 bits (787), Expect = 1e-87
Identities = 152/248 (61%), Positives = 186/248 (75%)
Frame = +1
Query: 130 FVLQRITQFAPGPGSHFVXXXXXXXXXXXMYKRLIXFHKEGKLSFKYVTTFNMDEYVGLP 309
+V+ +I + A G + V MYK+LI F+ G +SF+ V TFNMDEYV LP
Sbjct: 19 YVVTKINE-ATENGKYLVLGLPTGSTPLGMYKKLIEFYNAGVISFEKVKTFNMDEYVDLP 77
Query: 310 RDHPESYHYYMWNEFFKHIDIEPSNAHVLDGNASDLVLECQRFEKLIQEAGGVHLFIGGI 489
RDH ESYH +M++ FF+HIDI P+N H+LDGN SD EC+ +E+ I+E+GG+ LF+GGI
Sbjct: 78 RDHTESYHSFMFDNFFRHIDINPANIHILDGNTSDHEKECEEYERKIKESGGIDLFVGGI 137
Query: 490 GPDGHIAFNEPGSSLVSRTRVKTLAYDTLDANKRFFDNDISKVPRQALTVGVGTVMDAKE 669
GPDGHIAFNEPGSSL SRTR+KTL DT+ AN RFF DI+KVP QALTVGV TVMDA+E
Sbjct: 138 GPDGHIAFNEPGSSLASRTRIKTLNEDTIQANARFFGGDITKVPTQALTVGVQTVMDARE 197
Query: 670 VMILITGVHKSLALAKAVEEGVNHMWTVSAFQQHPQALFVCDEDATLELRVKTVKYFKSL 849
VMILITG HK+LAL +A+E G++HM TVSA Q H A F+ DEDATLEL+VKTVKYFK L
Sbjct: 198 VMILITGSHKALALHQAIECGISHMCTVSAMQMHRCATFIADEDATLELKVKTVKYFKGL 257
Query: 850 MAEHNKLI 873
M H L+
Sbjct: 258 MNHHRSLV 265
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 370 IEPSNAHVLDGNASDLVLECQRFEKLIQEAGGVHLFIG 483
IEP+N +L+GN+S ++ C ++++Q H++IG
Sbjct: 181 IEPTNVCLLNGNSS-VLSRCGEIDRMLQFFDDTHVYIG 217
>Z99281-43|CAJ76962.1| 257|Caenorhabditis elegans Hypothetical
protein Y57G11C.3b protein.
Length = 257
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 472 LFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAYDTLDANKRFFDNDISKVPRQALTVGVGT 651
LF+G +GPDGH A PG + R++ + + N D K P +T+ + T
Sbjct: 138 LFLG-VGPDGHTASIFPG-----KERLEKIT----ELNWVSVITDSPKPPPSRITLTLQT 187
Query: 652 VMDAKEVMILITGVHKS 702
+ AK V +I G K+
Sbjct: 188 LQHAKNVAFIICGKQKA 204
>Z99281-42|CAB16505.2| 269|Caenorhabditis elegans Hypothetical
protein Y57G11C.3a protein.
Length = 269
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 472 LFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAYDTLDANKRFFDNDISKVPRQALTVGVGT 651
LF+G +GPDGH A PG + R++ + + N D K P +T+ + T
Sbjct: 150 LFLG-VGPDGHTASIFPG-----KERLEKIT----ELNWVSVITDSPKPPPSRITLTLQT 199
Query: 652 VMDAKEVMILITGVHKS 702
+ AK V +I G K+
Sbjct: 200 LQHAKNVAFIICGKQKA 216
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 28.7 bits (61), Expect = 9.5
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Frame = -2
Query: 218 MPRGXPPVGRPSTKWLPGPGANCVIRWRTXTGG-----PVG--NDAGRFENXKTQSSG*X 60
+P G P +G PS+ G GAN + R GG P+G N F N T+S
Sbjct: 186 LPNGIPLIGVPSSHGRAGFGANYQDQARMAAGGGMAGMPMGWENQVNAFLNNTTKSKSRG 245
Query: 59 RPNGXKXESXKNS 21
R + S +S
Sbjct: 246 RDTRKRRSSSYSS 258
>U55373-6|AAC25889.1| 250|Caenorhabditis elegans Hypothetical
protein F26F12.2 protein.
Length = 250
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 937 QHNVFHHVLTTKYGMCLIVLLLSVYCVPPLNS 842
Q N F V K LI LLL YC+ P++S
Sbjct: 20 QENPFFKVAPNKKFQALIPLLLQDYCINPISS 51
>U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical
protein ZK1248.5 protein.
Length = 334
Score = 28.7 bits (61), Expect = 9.5
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 250 GKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDI--EPSNAHVLDGNASDLV- 420
G S Y T MD+Y L + YY+ N F + I + + ++ NA D+
Sbjct: 133 GNNSMAYATKKTMDQYKNLTGSMDHLHKYYVSNYDFGDLCIPKDLDTSGIVVKNARDVPD 192
Query: 421 LECQRFEKLIQEAGGVHLFIGGIGPD-GHIAFNEPG 525
+ +++ + + +G I D G +A+NE G
Sbjct: 193 TDILKYDAKVFKYERSKYVLGQIREDFGRVAYNEKG 228
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 604 RCQRTACWRPGCRRPGSSLASETPARSPVR*TRC 503
RC C RPGC R S S TP R P C
Sbjct: 89 RCSNQECPRPGCYR---SAGSSTPDRFPCERAGC 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,002,635
Number of Sequences: 27780
Number of extensions: 545016
Number of successful extensions: 1737
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3621523944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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