Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D06
         (1181 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173...    31   1.8  
11_06_0710 - 26492093-26493460                                         31   2.3  
12_01_0684 + 5828947-5829012,5831123-5832103,5832200-5832326,583...    29   7.2  
03_05_1021 - 29750155-29750220,29750342-29750428,29750614-297507...    29   7.2  
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340...    29   9.5  

>03_01_0219 +
           1731267-1731728,1732148-1732235,1732330-1732417,
           1732528-1732573,1732687-1732785,1734363-1734431,
           1735706-1736036,1736123-1736256,1736400-1737251
          Length = 722

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +3

Query: 255 KKGNNDNFDEDEEKAFKTAPVGKGGRHLSIPFDSTMTNGDLAKKQNGSAVRTNSLGSGAR 434
           K G   N D  EE   +T PV      ++   +S        K +NG+ V  + +GS  +
Sbjct: 528 KSGLTSNEDSGEEHLARTEPVASTSACVNT--NSVSATKLATKCENGANVSCDGVGSTGQ 585

Query: 435 TPPAER 452
           TPP ++
Sbjct: 586 TPPLQQ 591


>11_06_0710 - 26492093-26493460
          Length = 455

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 210 KSSDYNFDGSLKNINKKGNNDNFDEDEEKAFKTAP 314
           KSSD + D + K   KK  N + DED++K  K  P
Sbjct: 147 KSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKP 181


>12_01_0684 + 5828947-5829012,5831123-5832103,5832200-5832326,
            5832623-5832705,5832752-5832917,5833337-5833399,
            5833624-5833733,5834227-5834276,5834528-5834664,
            5835180-5835281,5835871-5835988,5836575-5836627,
            5836710-5836813,5836910-5836972,5837375-5837503,
            5837508-5837605,5838446-5838500,5839260-5839311,
            5839996-5840113,5841906-5842035,5842156-5842437
          Length = 1028

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 388  CFFARSPFVIVESKGIDKCRPPF-PTGAV 305
            CFFA   +V+ E K ID CR  + P G++
Sbjct: 960  CFFAAMKYVVGEGKSIDFCRANWLPGGSI 988


>03_05_1021 -
           29750155-29750220,29750342-29750428,29750614-29750799,
           29750965-29751059,29751179-29751284,29751378-29751452,
           29751548-29751679,29751782-29751961,29752371-29752567,
           29752651-29752906
          Length = 459

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 558 KISVRANRDELVQKGILLPESPVT 629
           KIS + N  ELV+K   LPE P+T
Sbjct: 403 KISYKLNHGELVEKENWLPEGPIT 426


>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
            3404071-3404562,3404718-3404821,3404913-3404994,
            3405085-3405441,3405532-3406089,3406376-3406479,
            3406575-3406650,3406764-3406898,3407192-3407494,
            3407581-3408345,3409459-3412591,3412763-3412882
          Length = 2445

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 261  GNNDNFDEDEEKAFKTAPVGKGGRH 335
            G+ND+ DED    F T PV    +H
Sbjct: 2263 GHNDSCDEDTADMFSTEPVASNNQH 2287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,280,821
Number of Sequences: 37544
Number of extensions: 368768
Number of successful extensions: 1082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3619930760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)