Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D06
         (1181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    32   0.91 
Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical pr...    29   6.4  
Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    29   8.5  
U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    29   8.5  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    29   8.5  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    29   8.5  

>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 585  ELVQKGILLPESPVTPVPEANEELSPVYGGEXARAETN 698
            E+ ++GI LP SP TP+P A  EL        A AET+
Sbjct: 1180 EMAKRGIELPLSPKTPIPIAT-ELEKAASANFATAETS 1216


>Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical
           protein F13E9.9 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
 Frame = +3

Query: 201 DNDKSSDYNFDGSLKNINKKGNNDNFDED--------EEKAFKTAPVGKGGRHLSIPFDS 356
           DND+S  YNF  S KN   +   ++F+ED         E+   T    +     +  FD 
Sbjct: 77  DNDESY-YNFKNSPKNKRDETRENDFNEDNDEDSMERRERDSATRSRFRDSNEDTDSFDG 135

Query: 357 TMTNGDLAKKQNGSAVRTNSLGSGART 437
           ++ N D  K Q+  +   + + S +R+
Sbjct: 136 SVKNDDNEKPQSSESNENSDVSSKSRS 162


>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 210 KSSDYNFDGSLKNINKKGNNDNFDEDEE 293
           KSSD NFDGS  N       +  DE  E
Sbjct: 663 KSSDDNFDGSFSNFEYDNKENEHDEANE 690


>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +3

Query: 201 DNDKSSDYNFDGSL-KNINKKGNNDNFDEDEEKAFKTAPVGKGGRHLSIPFDSTMTNGDL 377
           D D+  D    G   K+  KKG  ++ DED+ K  K    GK G+  +   D      D 
Sbjct: 259 DEDEDDDGAKHGKKSKSKKKKGKKNDDDEDDHKKGKKGKKGKKGKKKNKDDDEDEDEDD- 317

Query: 378 AKKQNGSAVRTNSL 419
             + NG   R + +
Sbjct: 318 -DEDNGDLERVDGI 330


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +3

Query: 201 DNDKSSDYNFDGSL-KNINKKGNNDNFDEDEEKAFKTAPVGKGGRHLSIPFDSTMTNGDL 377
           D D+  D    G   K+  KKG  ++ DED+ K  K    GK G+  +   D      D 
Sbjct: 310 DEDEDDDGAKHGKKSKSKKKKGKKNDDDEDDHKKGKKGKKGKKGKKKNKDDDEDEDEDD- 368

Query: 378 AKKQNGSAVRTNSL 419
             + NG   R + +
Sbjct: 369 -DEDNGDLERVDGI 381


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 210 KSSDYNFDGSLKNINKKGNNDNFDEDEE 293
           KSSD NFDGS  N       +  DE  E
Sbjct: 663 KSSDDNFDGSFSNFEYDNKENEHDEANE 690


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,018,023
Number of Sequences: 27780
Number of extensions: 301821
Number of successful extensions: 1089
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)