Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D03
         (1404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.98 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   6.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.98
 Identities = 23/88 (26%), Positives = 27/88 (30%)
 Frame = -2

Query: 599 PPPXGXXPXGPPAXXXPPPXDPRDXXXGRXXKXRTRXRXAGPXARTPE*XGXGXPPXXAX 420
           PPP G      P    PPP +            + R     P     +      PP    
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQ------PPPAP- 585

Query: 419 XPXPPPPXXPVNXARGGKXGGXXXPGPP 336
            P PPP   P +   GG  GG     PP
Sbjct: 586 -PPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 6.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 535 GSXGGGXXXAGGPXGXXPXGGG 600
           G+ GGG   +GGP      GGG
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGG 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,056
Number of Sequences: 2352
Number of extensions: 8078
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 162558000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)